Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.
Comment: Migrated to Confluence 5.3

Table of Contents
minLevel2
outlinetrue
stylenone

For the Impatient

Since some users might want to get their test version up and running as fast as possible, offered below is an unsupported outline of getting DSpace to run quickly in a Unix-based environment using the DSpace source release.

Warning

Only experienced unix admins should even attempt the following without going to the detailed Installation Instructions

Code Block

useradd -m dspace
gunzip -c dspace-1.x-src-release.tar.gz | tar -xf -
createuser -U postgres -d -A -P dspace
createdb -U dspace -E UNICODE dspace
cd [dspace-source]/dspace/config
vi dspace.cfg
mkdir [dspace]
chown dspace [dspace]
su - dspace
cd [dspace-source]/dspace
mvn package
cd [dspace-source]/dspace/target/dspace-<version>-build
ant fresh_install
cp -r [dspace]/webapps/* [tomcat]/webapps
/etc/init.d/tomcat start
[dspace]/bin/dspace create-administrator

...

Warning
titleJava 7 is currently unsupported

DSpace does not currently support Java 7, as there is a known issue with Java 7 and Lucene/SOLR (which DSpace uses for search & browse functionality). For more details, see this article on the Apache site: "WARNING: Index corruption and crashes in Apache Lucene Core / Apache Solr with Java 7" as well as this Java bug report: 7073868

Note
titleOther flavors of Java may cause issues

Only Oracle's Java has been tested with each release and is known to work correctly. Other flavors of Java may pose problems.

...

Note
titleDSpace 1.7.x requires usage of Maven 2.2.x

DSpace 1.7.x required usage of Maven 2.2.x, as it did not build properly when using Maven 2.0.x or Maven 3.x. This was a known issue (see DS-788). However, DSpace 1.8.x resolved this issue so that DSpace now builds properly with Maven 2.2.x or above.

...

Maven is necessary in the first stage of the build process to assemble the installation package for your DSpace instance. It gives you the flexibility to customize DSpace using the existing Maven projects found in the _\[dspace-source\]/dspace/modules_ directory or by adding in your own Maven project to build the installation package for DSpace, and apply any custom interface "overlay" changes.

Maven can be downloaded from the following location: http://maven.apache.org/download.html

...

Apache Ant 1.8 or later (Java build tool)

...

Apache Ant is still required for the second stage of the build process. It is used once the installation package has been constructed in _\[dspace-source\]/dspace/target/dspace-<version>-build_ and still uses some of the familiar ant build targets found in the 1.4.x build process.

Ant can be downloaded from the following location: http://ant.apache.org

Relational Database

...

(PostgreSQL or Oracle)

...

  • PostgreSQL 8.3 to 8.4 PostgreSQL can be downloaded from the following location: http://www.postgresql.org/ . It is highly recommended that you try to work with Postgres 8.4 or greater, however 8.3 should still work. Unicode (specifically UTF-8) support must be enabled. This is enabled by default in 8.0+. Once installed, you need to enable TCP/IP connections (DSpace uses JDBC). In postgresql.conf: uncomment the line starting: listen_addresses = 'localhost'. Then tighten up security a bit by editing pg_hba.conf and adding this line: host dspace dspace 127.0.0.1 255.255.255.255 md5. Then restart PostgreSQL.
  • Oracle 10g or greater Details on acquiring Oracle can be downloaded from the following location: http://www.oracle.com/database/. You will need to create a database for DSpace. Make sure that the character set is one of the Unicode character sets. DSpace uses UTF-8 natively, and it is suggested that the Oracle database use the same character set. You will also need to create a user account for DSpace (e.g. dspace) and ensure that it has permissions to add and remove tables in the database. Refer to the Quick Installation for more details.
    • Wiki Markup
      You need to compile DSpace with an Oracle driver (ojdbc6.jar) corresponding to your Oracle version - update the version in _\[dspace-source\]/pom.xml_ E.g.:
      Code Block
      
      <dependency>
        <groupId>com.oracle</groupId>
        <artifactId>ojdbc6</artifactId>
        <version>11.2.0.3</version>
      </dependency>
      
    • Wiki Markup
      You need to set the following in _\[dspace\]/config/dspace.cfg_ (or its _\[dspace-src\]_ equivalent):
      Code Block
      
      db.driver = oracle.jdbc.OracleDriver
      db.url = jdbc:oracle:thin:@database.host:1521/SID
      
      Where SID is the SID of your database defined in tnsnames.ora or you can use a full SID definition, e.g.:
      Code Block
      
      db.url = jdbc:oracle:thin:@(description=(address_list=(address=(protocol=TCP)(host=localhost)(port=1521)))(connect_data=(service_name=DSPACE)))
      
      Also set your own username and password:
      Code Block
      
      db.username = your_oracle_username
      db.password = your_oracle_password
      
      • NOTE: If the database server is not on the same machine as DSpace, you must install the Oracle client to the DSpace server and point tnsnames.ora and listener.ora files to the database the Oracle server.
      • NOTE: DSpace uses sequences to generate unique object IDs NOTE: DSpace uses sequences to generate unique object IDs — beware Oracle sequences, which are said to lose their values when doing a database export/import, say restoring from a backup. Be sure to run the script etc/update-sequences.sql after importing.
      • For people interested in switching from Postgres to Oracle, I know of no tools that would do this automatically. You will need to recreate the community, collection, and eperson structure in the Oracle system, and then use the item export and import tools to move your content over.

    Servlet Engine

    ...

    (Apache Tomcat 5.5 or 6, Jetty, Caucho Resin or equivalent)

    ...

    • Apache Tomcat 5.5 or later. Tomcat can be downloaded from the following location: http://tomcat.apache.org.
      • Note that DSpace will need to run as the same user as Tomcat, so you might want to install and run Tomcat as a user called 'dspace'. Set the environment variable TOMCAT_USER appropriately.
      • You need to ensure that Tomcat has a) enough memory to run DSpace and b) uses UTF-8 as its default file encoding for international character support. So ensure in your startup scripts (etc) that the following environment variable is set: JAVA_OPTS="-Xmx512M -Xms64M -Dfile.encoding=UTF-8"unmigrated-wiki-markup
      • *

        Modifications

        in

        * *_\

        [tomcat

        \

        ]/conf/server.xml

        {_}*

        :

        You

        also

        need

        to

        alter

        Tomcat's

        default

        configuration

        to

        support

        searching

        and

        browsing

        of

        multi-byte

        UTF-8

        correctly.

        You

        need

        to

        add

        a

        configuration

        option

        to

        the

        _

        <Connector>

        _

        element

        in

        _\

        [tomcat

        \

        ]/config/server.xml

        _

        :

        _

        URIEncoding="UTF-8"

        _

        e.g.

        if

        you're

        using

        the

        default

        Tomcat

        config,

        it

        should

        read:

        Code Block
        
        <!-- Define a non-SSL HTTP/1.1 Connector on port 8080 -->
        <Connector port="8080"
                      maxThreads="150"
                      minSpareThreads="25"
        	      maxSpareThreads="75"
                      enableLookups="false"
                      redirectPort="8443"
        	      acceptCount="100"
                      connectionTimeout="20000"
        	      disableUploadTimeout="true"
                      URIEncoding="UTF-8"/>
        

        You may change the port from 8080 by editing it in the file above, and by setting the variable CONNECTOR_PORT in server.xml.

    • Jetty or Caucho Resin DSpace will also run on an equivalent servlet Engine, such as Jetty (http://www.mortbay.org/jetty/index.html) or Caucho Resin (http://www.caucho.com/). Jetty and Resin are configured for correct handling of UTF-8 by default.

    ...

    Perl

    ...

    (only

    ...

    required

    ...

    for

    ...

    [dspace

    ...

    ]/bin/dspace-info.pl)

    Installation Instructions

    ...

    • Binary Release (dspace-<version>-release.zip)
      • This distribution will be adequate for most cases of running a DSpace instance. It is intended to be the quickest way to get DSpace installed and running while still allowing for customization of the themes and branding of your DSpace instance.
      • This method allows you to customize DSpace configurations (in dspace.cfg) or user interfaces, using basic pre-built interface "overlays".
      • It downloads "precompiled" libraries for the core dspace-api, supporting servlets, taglibraries, aspects and themes for the dspace-xmlui, dspace-xmlui and other webservice/applications.
      • This approach only exposes selected parts of the application for customization. All other modules are downloaded from the 'Maven Central Repository' The directory structure for this release is the following:
        • Wiki Markup_\[dspace-source\]_
          • dspace/ - DSpace 'build' and configuration module
    • Source Release (dspace-<version>-src-release.zip)
      • This method is recommended for those who wish to develop DSpace further or alter its underlying capabilities to a greater degree.
      • It contains all dspace code for the core dspace-api, supporting servlets, taglibraries, aspects and themes for Manakin (dspace-xmlui), and other webservice/applications.
      • Provides all the same capabilities as the binary release. The directory structure for this release is more detailed:
        • Wiki Markup_\[dspace-source\]_
          • dspace/ - DSpace 'build' and configuration module
          • dspace-api/ - Java API source module
          • dspace-discovery - Discovery source module
          • dspace-jspui/ - JSP-UI source module
          • dspace-oai - OAI-PMH source module
          • dspace-xmlui - XML-UI (Manakin) source module
          • dspace-lni - Lightweight Network Interface source module
          • dspace-stats - Statistics source module
          • dspace-sword - SWORD (Simple Web-serve Offering Repository Deposit) deposit service source module
          • dspace-swordv2 - SWORDv2 source module
          • dspace-sword-client - XMLUI client for SWORD
          • pom.xml - DSpace Parent Project definition

    ...

    DSpace uses three separate directory trees. Although you don't need to know all the details of them in order to install DSpace, you do need to know they exist and also know how they're referred to in this document:

    ...

    1. *The installation directory*, referred to as {{\[dspace\]}}. This is the location where DSpace is installed and running off of it is the location that gets defined in the {{dspace.cfg}} as "dspace.dir". It is where all the DSpace configuration files, command line scripts, documentation and webapps will be installed to.
    2. Wiki Markup*The source directory*, referred to as {{\[dspace-source\]}} . This is the location where the DSpace release distribution has been unzipped into. It usually has the name of the archive that you expanded such as {{dspace}}\-{{<version>}}\-{{release}} or {{dspace}}\-{{<version>}}\-{{src}}\-{{release}}. Normally it is the directory where all of your "build" commands will be run.&nbsp; 
    3. The web deployment directory. This is the directory that contains your DSpace web Wiki Markup*The web deployment directory*. This is the directory that contains your DSpace web application(s). In DSpace 1.5.x and above, this corresponds to {{\[dspace\]/webapps}} by default. However, if you are using Tomcat, you may decide to copy your DSpace web applications from {{\applications from [dspace\]/webapps/}} to {{\[tomcat\]/webapps/}} (with {{\[tomcat\]}} being wherever you installed Tomcat‚ also known as {{$CATALINA_HOME}}).
      For details on the contents of these separate directory trees, refer to directories.html. _Note that the_ {{\[dspace-source\]}} _and_ {{\[dspace\]}} _directories are always separate\!_

    Installation

    This method gets you up and running with DSpace quickly and easily. It is identical in both the Default Release and Source Release distributions.

    1. Create the DSpace user. This needs to be the same user that Tomcat (or Jetty etc.) will run as. e.g. as rootrun:

      Code Block
      useradd -m dspace
    2. Download the latest DSpace release There are two version available with each release of DSpace: (dspace-1.x-release. and dspace-1.x-src-release.xxx); you only need to choose one. If you want a copy of all underlying Java source code, you should download the dspace-1.x-src-release.xxx Within each version, you have a choice of compressed file format. Choose the one that best fits your environment.
    3. Unpack the DSpace software. After downloading the software, based on the compression file format, choose one of the following methods to unpack your software:
      1. Zip file. If you downloaded dspace-1.8-release.zipdo the following:

        Code Block
        unzip dspace-1.8-release.zip
      2. .gz file. If you downloaded dspace-1.8-release.tar.gzdo the following:

        Code Block
        gunzip -c dspace-1.8-release.tar.gz | tar -xf -
      3. .bz2 file. If you downloaded _dspace-1.8-release.tar.bz2_do the following:

        unmigrated-wikimarkup
        Code Block
        bunzip2 dspace-1.8-release.tar.bz | tar -xf -
        -

        For

        ease

        of

        reference,

        we

        will

        refer

        to

        the

        location

        of

        this

        unzipped

        version

        of

        the

        DSpace

        release

        as

        _\

        [dspace-source

        \

        ]

        _

        in

        the

        remainder

        of

        these

        instructions.

        After

        unpacking

        the

        file,

        the

        user

        may

        which

        to

        change

        the

        ownership

        of

        the

        _

        dspace-1.6-release

        _

        to

        the

        'dspace'

        user.

        (And

        you

        may

        need

        to

        change

        the

        group).

    4. Database Setup
      • Also see notes above
      • PostgreSQL:
        • A PostgreSQL JDBC driver is configured as part of the default DSpace build. You no longer need to copy any PostgreSQL jars to get PostgreSQL installed.
        • Create a dspace database user. This is entirely separate from the dspaceoperating-system user created above.

          Code Block
          createuser -U postgres -d -A -P dspace

          You will be prompted for the password of the PostgreSQL superuser (postgres). Then you'll be prompted (twice) for a password for the new dspace user.

        • Create a dspace database, owned by the dspace PostgreSQL user (you are still logged in at 'root'):

          Code Block
          createdb -U dspace -E UNICODE dspace

          You will be prompted for the password of the DSpace database user. (This isn't the same as the dspace user's UNIX password.)

      • Oracle:
        • Setting up DSpace to use Oracle is a bit different now. You will need still need to get a copy of the Oracle JDBC driver, but instead of copying it into

          a

          the lib directory you will need to install it into your local Maven repository. (You'll need to download it first from this location: http://www.oracle.com/technetwork/database/enterprise-edition/jdbc-112010-090769.html.) Run the following command (all on one line):

          Code Block
          
          mvn install:install-file
              -Dfile=ojdbc6.jar
              -DgroupId=com.oracle
              -DartifactId=ojdbc6
              -Dversion=11.2.0.3
                -Dversion=11-Dpackaging=jar
              -DgeneratePom=true
          
        • You need to compile DSpace with an Oracle driver (ojdbc6.jar) corresponding to your Oracle version - update the version in [dspace-source]/pom.xmlE.g.:

          Code Block
          <dependency>
            <groupId>com.oracle</groupId>
            <artifactId>ojdbc6</artifactId>
            <version>11.2.0.2.0
              -Dpackaging=jar
              -DgeneratePom=true3</version>
          </dependency>
          
        • Create a database for DSpace. Make sure that the character set is one of the Unicode character sets. DSpace uses UTF-8 natively, and it is required that the Oracle database use the same character set. Create a user account for DSpace (e.g. dspace,) and ensure that it has permissions to add and remove tables in the database.unmigrated-wiki-markup
        • Edit

          the

          _\

          [dspace-source

          \

          ]/dspace/config/dspace.cfg

          _

          database

          settings:

          Code Block
          db.name   = oracle
          db.name   = oracle
          db.url    driver = oracle.jdbc.OracleDriver
          db.url = jdbc:oracle:thin:@host:port/SID
          

          Where SID is the SID of your database defined in tnsnames.ora, default Oracle port is 1521.
          Alternatively, you can use a full SID definition, e.g.:

          Code Block
          db.url = jdbc:oracle:thin:@//host:port/dspace
          db.driver = oracle.jdbc.OracleDriver
          (description=(address_list=(address=(protocol=TCP)(host=localhost)(port=1521)))(connect_data=(service_name=DSPACE)))
          

          Also set the username and password of the database you created in step 3:

          Code Block
          db.username = your_oracle_username
          db.password = your_oracle_password
          
    5. Initial Configuration: Edit [dspace-source Wiki Markup*Initial Configuration:* Edit {{\[dspace-source\]/dspace/config/dspace.cfg}}, in particular you'll need to set these properties:
        unmigrated-wiki-markup
      • {{dspace.dir}} \ - must be set to the _\[dspace\]_ (installation) directory.
      • dspace.url - complete URL of this server's DSpace home page.
      • dspace.hostname - fully-qualified domain name of web server.
      • dspace.name - "Proper" name of your server, e.g. "My Digital Library".
      • db.password - the database password you entered in the previous step.
      • mail.server - fully-qualified domain name of your outgoing mail server.
      • mail.from.address - the "From:" address to put on email sent by DSpace.
      • feedback.recipient - mailbox for feedback mail.
      • mail.admin - mailbox for DSpace site administrator.
      • alert.recipient - mailbox for server errors/alerts (not essential but very useful!)
      • registration.notify- mailbox for emails when new users register (optional)

        Info

        You can interpolate the value of one configuration variable in the value of another one. For example, to set feedback.recipient to the same value as mail.admin, the line would look like:
        feedback.recipient = ${mail.admin}
        Refer to the General Configuration section for details and examples of the above.

      unmigrated-wiki-markup
    6. *

      DSpace

      Directory:

      *

      Create

      the

      directory

      for

      the

      DSpace

      installation

      (i.e.

      {{\

      [dspace

      \

      ]

      }}

      ).

      As

      _

      root

      _

      (or

      a

      user

      with

      appropriate

      permissions),

      run:

      Code Block
      mkdir [dspace]
      chown dspace [dspace]

      (Assuming the dspace UNIX username.)

    7. Installation Package: As the dspaceUNIX user, generate the DSpace installation package.

      Code Block
      
      cd [dspace-source]/dspace/
      mvn package
      
      unmigrated-wiki-markup
      Info
      titleDefaults to PostgreSQL settings

      Without any extra arguments, the DSpace installation package is initialized for PostgreSQL. If you want to use Oracle instead, you should build the DSpace installation package as follows:
      mvn -Ddb.name=oracle package

      *

    8. Build

      DSpace

      and

      Initialize

      Database:

      *

      As

      the

      _

      dspace

      _

      UNIX

      user,

      initialize

      the

      DSpace

      database

      and

      install

      DSpace

      to

      {{\

      [dspace

      \

      ]

      \

      _

      }}

      :

      Code Block
      cd [dspace-source]/dspace/target/dspace-[version]-build
      ant fresh_install
      Info

      To see a complete list of build targets, run: ant help The most likely thing to go wrong here is the database connection. See the Common Problems Section.

    9. Deploy Web Applications:
      Anchor
      deployment
      deployment
      You have two choices or techniques for having Tomcat/Jetty/Resin serve up your web applications:
      • Wiki Markup_Technique A._ Simple and complete. You copy only (or all) of the DSpace Web application(s) you wish to use from the \ [dspace\]/webapps directory to the appropriate directory in your Tomcat/Jetty/Resin installation. For example: \\ {{cp \
        cp -R \ [dspace\]/webapps/\* \ [tomcat\]/webapps\*}} (This will copy all the web applications to Tomcat). \\ {{cp \
        cp -R \ [dspace\]/webapps/jspui \ [tomcat\]/webapps\*}} (This will copy only the jspui web application to Tomcat.)unmigrated-wiki-markup
      • _

        Technique

        B.

        _

        Tell

        your

        Tomcat/Jetty/Resin

        installation

        where

        to

        find

        your

        DSpace

        web

        application(s).

        As

        an

        example,

        in

        the

        {{

        <Host>

        }}

        section

        of

        your

        {{\

        [tomcat

        \

        ]/conf/server.xml

        \}}

        you

        could

        add

        lines

        similar

        to

        the

        following

        (but

        replace

        {{\

        [dspace

        \

        ]

        }}

        with

        your

        installation

        location):

        Code Block
        <!-- Define the default virtual host
        	Note:  XML Schema validation will not work with Xerces 2.2.
        	-->
        	<Host name="localhost"  appBase="[dspace]/webapps"
        	....
    10. Administrator Account:Create an initial administrator account:

      Code Block
      [dspace]/bin/dspace create-administrator
    11. Initial Startup!Now the moment of truth! Start up (or restart) Tomcat/Jetty/Resin. Visit the base URL(s) of your server, depending on which DSpace web applications you want to use. You should see the DSpace home page. Congratulations! Base URLs of DSpace Web Applications:

    ...

    Multilingual Installation

    Wiki MarkupIn order to deploy a multilingual version of DSpace you have to configure two parameters in _\[dspace-source\]/config/dspace.cfg:_

    • default.locale, e.g. default.locale = en
    • webui.supported locales, e.g. webui.supported.locales = en, de

    ...

    The following sections show how to set up the most commonly-used Java Servlet containers to support HTTP over SSL.

    ...

    Enabling the HTTPS support in Tomcat 5.0

    ...

    1. For Production use: Follow this procedure to set up SSL on your server. Using a "real" server certificate ensures your users' browsers will accept it without complaints. In the examples below, $CATALINA_BASEis the directory under which your Tomcat is installed.
      1. Create a Java keystore for your server with the password changeit, and install your server certificate under the alias "tomcat". This assumes the certificate was put in the file server.pem:

        Code Block
        $JAVA_HOME/bin/keytool -import -noprompt -v -storepass changeit
        	-keystore $CATALINA_BASE/conf/keystore -alias tomcat -file
        	myserver.pem
      2. Install the CA (Certifying Authority) certificate for the CA that granted your server cert, if necessary. This assumes the server CA certificate is in ca.pem:

        Code Block
        $JAVA_HOME/bin/keytool -import -noprompt -storepass changeit
        	-trustcacerts -keystore $CATALINA_BASE/conf/keystore -alias ServerCA
        	-file ca.pem
        
      3. Optional – ONLY if you need to accept client certificates for the X.509 certificate stackable authentication module See the configuration section for instructions on enabling the X.509 authentication method. Load the keystore with the CA (certifying authority) certificates for the authorities of any clients whose certificates you wish to accept. For example, assuming the client CA certificate is in client1.pem:

        Code Block
        $JAVA_HOME/bin/keytool -import -noprompt -storepass changeit
        	-trustcacerts -keystore $CATALINA_BASE/conf/keystore  -alias client1
        	-file client1.pem
        
      4. Now add another Connector tag to your server.xmlTomcat configuration file, like the example below. The parts affecting or specific to SSL are shown in bold. (You may wish to change some details such as the port, pathnames, and keystore password)

        Code Block
        <Connector port="8443"
                       maxThreads="150" minSpareThreads="25"
        	           maxSpareThreads="75"
                       enableLookups="false"
        	           disableUploadTimeout="true"
                       acceptCount="100" debug="0"
                      scheme="https" secure="true" sslProtocol="TLS"
        	keystoreFile="conf/keystore" keystorePass="changeit" clientAuth="true" - ONLY if using client X.509 certs for authentication!
        	truststoreFile="conf/keystore" trustedstorePass="changeit" />
        

        Also, check that the default Connector is set up to redirect "secure" requests to the same port as your SSL connector, e.g.:

        Code Block
        <Connector port="8080"
                         maxThreads="150" minSpareThreads="25"
        	             maxSpareThreads="75"
                         enableLookups="false"
        	             redirectPort="8443"
                         acceptCount="100" debug="0"  	/>
        
    2. Quick-and-dirty Procedure for Testing: If you are just setting up a DSpace server for testing, or to experiment with HTTPS, then you don't need to get a real server certificate. You can create a "self-signed" certificate for testing; web browsers will issue warnings before accepting it but they will function exactly the same after that as with a "real" certificate. In the examples below, $CATALINA_BASEis the directory under which your Tomcat is installed.
      1. Optional – ONLY if you don't already have a server certificate. Follow this sub-procedure to request a new, signed server certificate from your Certifying Authority (CA):
        • Create a new key pair under the alias name "tomcat". When generating your key, give the Distinguished Name fields the appropriate values for your server and institution. CN should be the fully-qualified domain name of your server host. Here is an example:

          Code Block
          
          $JAVA_HOME/bin/keytool -genkey -alias tomcat -keyalg RSA -keysize
          	1024 \
            -keystore $CATALINA_BASE/conf/keystore -storepass changeit
          	-validity 365 \
            -dname 'CN=dspace.myuni.edu, OU=MIT Libraries, O=Massachusetts
          	Institute of Technology, L=Cambridge, S=MA, C=US'
          
        • Then, create a CSR (Certificate Signing Request) and send it to your Certifying Authority. They will send you back a signed Server Certificate. This example command creates a CSR in the file tomcat.csr

          Code Block
          
          $JAVA_HOME/bin/keytool -keystore $CATALINA_BASE/conf/keystore
          	-storepass changeit \
             -certreq -alias tomcat -v -file tomcat.csr
          
        • Before importing the signed certificate, you must have the CA's certificate in your keystore as a trusted certificate. Get their certificate, and import it with a command like this (for the example mitCA.pem):

          Code Block
          
          $JAVA_HOME/bin/keytool -keystore $CATALINA_BASE/conf/keystore
          	-storepass changeit \
               -import -alias mitCA -trustcacerts -file mitCA.pem
          
        • Finally, when you get the signed certificate from your CA, import it into the keystore with a command like the following example: (cert is in the file signed-cert.pem)

          Code Block
          
          $JAVA_HOME/bin/keytool -keystore $CATALINA_BASE/conf/keystore
          	-storepass changeit \
               -import -alias tomcat -trustcacerts -file signed-cert.pem
          

          Since you now have a signed server certificate in your keystore, you can, obviously, skip the next steps of installing a signed server certificate and the server CA's certificate.

      2. Create a Java keystore for your server with the password changeit, and install your server certificate under the alias "tomcat". This assumes the certificate was put in the file server.pem:

        Code Block
        
        $JAVA_HOME/bin/keytool -genkey -alias tomcat -keyalg RSA -keystore
        	$CATALINA_BASE/conf/keystore -storepass changeit
        

        When answering the questions to identify the certificate, be sure to respond to "First and last name" with the fully-qualified domain name of your server (e.g. test-dspace.myuni.edu). The other questions are not important.

      3. Optional – ONLY if you need to accept client certificates for the X.509 certificate stackable authentication module See the configuration section for instructions on enabling the X.509 authentication method. Load the keystore with the CA (certifying authority) certificates for the authorities of any clients whose certificates you wish to accept. For example, assuming the client CA certificate is in client1.pem:

        Code Block
        
        $JAVA_HOME/bin/keytool -import -noprompt -storepass changeit
        	-trustcacerts -keystore $CATALINA_BASE/conf/keystore  -alias client1
        	-file client1.pem
        
      4. Follow the procedure in the section above to add another Connector tag, for the HTTPS port, to your server.xml file.

    ...

    Using SSL on Apache HTTPD with mod_jk

    ...

    If you choose Apache HTTPD as your primary HTTP server, you can have it forward requests to the Tomcat servlet container via Apache Jakarta Tomcat Connector. This can be configured to work over SSL as well. First, you must configure Apache for SSL; for Apache 2.0 see Apache SSL/TLS Encryption for information about using mod_ssl.

    If you are using X.509 Client Certificates for authentication: add these configuration options to the appropriate httpd configuration file, e.g. ssl.conf, and be sure they are in force for the virtual host and namespace locations dedicated to DSpace:

    Code Block
    
    ##  SSLVerifyClient can be "optional" or
    	"require"
            SSLVerifyClient optional
            SSLVerifyDepth  10
            SSLCACertificateFile
    	path-to-your-client-CA-certificate
            SSLOptions StdEnvVars ExportCertData
    

    ...

    A Handle server runs as a separate process that receives TCP requests from other Handle servers, and issues resolution requests to a global server or servers if a Handle entered locally does not correspond to some local content. The Handle protocol is based on TCP, so it will need to be installed on a server that can broadcast and receive TCP on port 2641.

    1. To configure your DSpace installation to run the handle server, run the following command:

      unmigrated-wiki-markup
      Code Block
      [dspace]/bin/dspace make-handle-config [dspace]/handle-server

      Ensure

      that

      _\

      [dspace

      \

      ]/handle-server

      _

      matches

      whatever

      you

      have

      in

      _

      dspace.cfg

      _

      for

      the

      _

      handle.dir

      _

      property.

      Wiki Markup
    2. Edit

      the

      resulting

      _\

      [dspace

      \

      ]/handle-server/config.dct

      _

      file

      to

      include

      the

      following

      lines

      in

      the

      _

      "server_config"

      _

      clause:

      Code Block
      "storage_type" = "CUSTOM"
      "storage_class" = "org.dspace.handle.HandlePlugin"
      

      This tells the Handle server to get information about individual Handles from the DSpace code.

    3. Once the configuration file has been generated, you will need to go to http://hdl.handle.net/4263537/5014 to upload the generated sitebndl.zip file. The upload page will ask you for your contact information. An administrator will then create the naming authority/prefix on the root service (known as the Global Handle Registry), and notify you when this has been completed. You will not be able to continue the handle server installation until you receive further information concerning your naming authority.unmigrated-wiki-markup.
    4. When CNRI has sent you your naming authority prefix, you will need to edit the _config.dct_ file. The file will be found in _/\[dspace\]/handle-server_. Look for _"300:0.NA/YOUR_NAMING_AUTHORITY"_. Replace _YOUR_NAMING_AUTHORITY_ with the assigned naming authority prefix sent to you.
    5. Now start your handle server (as the dspace user):

      Code Block
      [dspace]/bin/start-handle-server

      Note that since the DSpace code manages individual Handles, administrative operations such as Handle creation and modification aren't supported by DSpace's Handle server.

    Updating Existing Handle Prefixes

    Wiki MarkupIf you need to update the handle prefix on items created before the CNRI registration process you can run the _\[dspace\]/bin/dspace update-handle-prefix script_. You may need to do this if you loaded items prior to CNRI registration (e.g. setting up a demonstration system prior to migrating it to production). The script takes the current and new prefix as parameters. For example:

    Code Block
    [dspace]/bin/dspace update-handle-prefix 123456789 1303

    ...

    Sitemaps allow DSpace to expose its content without the crawlers having to index every page. HTML sitemaps provide a list of all items, collections and communities in HTML format, whilst Google sitemaps provide the same information in gzipped XML format.unmigrated-wiki-markup

    To generate the sitemaps, you need to run _\[dspace\]/bin/dspace generate-sitemaps_ This creates the sitemaps in _\[dspace\]/sitemaps/_

    The sitemaps can be accessed from the following URLs:

    ...

    When running _\[dspace\]/bin/dspace generate-sitemaps_ the script informs Google that the sitemaps have been updated. For this update to register correctly, you must first register your Google sitemap index page (_/dspace/sitemap_) with Google at [http://www.google.com/webmasters/sitemaps/|http://www.google. com/webmasters/sitemaps/|http://www.google.com/webmasters/sitemaps/]. If your DSpace server requires the use of a HTTP proxy to connect to the Internet, ensure that you have set _http.proxy.host_ and _http.proxy.port_ in _\[dspace\]/config/dspace.cfg_

    Wiki MarkupThe URL for pinging Google, and in future, other search engines, is configured in _\[dspace-space\]/config/dspace.cfg_ using the _sitemap.engineurls_ setting where you can provide a comma-separated list of URLs to 'ping'.

    You can generate the sitemaps automatically every day using an additional cron job:

    Code Block
    
    # Generate sitemaps
    
    
    0 6 * * * [dspace]/bin/dspace generate-sitemaps
    

    ...

    DSpace uses the Apache Solr application underlaying the statistics. There is no need to download any separate software. All the necessary software is included. To understand all of the configuration property keys, the user should refer to DSpace Statistic Configuration for Statistics for detailed configuration information.

    1. DSpace Configuration for Accessing Solr. In the dspace.cfgfile review the following fields to make sure they are uncommented:

      Code Block
      solr.log.server = ${dspace.baseUrl}/solr/statistics
      solr.dbfile = ${dspace.dir}/config/GeoLiteCity.dat
      solr.spiderips.urls = http://iplists.com/google.txt, \
                            http://iplists.com/inktomi.txt, \
                            http://iplists.com/lycos.txt, \
                            http://iplists.com/infoseek.txt, \
                            http://iplists.com/altavista.txt, \
                            http://iplists.com/excite.txt, \
                            http://iplists.com/misc.txt, \
                            http://iplists.com/non_engines.txt
    2. DSpace logging configuration for Solr. If your DSpace instance is protected by a proxy server, in order for Solr to log the correct IP address of the user rather than of the proxy, it must be configured to look for the X-Forwarded-For header.  This feature can be enabled by ensuring the following setting is uncommented in the logging section of dspace.cfg:

      Code Block
      useProxies = true
    3. Configuration Control. In the [dspace]/config/modules/solr-statistics.cfg set file set the following property key: _statistics.item.authorization.admin=true_. This will require the user to sign on in to see that statistics. Setting the statistics to "false" will make them publicly available.
    4. Final steps.
      • Perform the following step:

        Code Block
        
        cd [dspace-source]/dspace
        mvn package
        cd [dspace-source]/dspace/target/dspace-<version>-build
        ant -Dconfig=[dspace]/config/dspace.cfg update
        cp -R [dspace]/webapps/* [TOMCAT]/webapps
        
        Wiki Markup

        If

        you

        only

        need

        to

        build

        the

        statistics,

        and

        don't

        make

        any

        changes

        to

        other

        web

        applications,

        you

        can

        replace

        the

        copy

        step

        above

        with:

        _

        cp

        \

        -R

        \

        [dspace

        \

        ]/webapps/solr

        \

        [TOMCAT

        \

        ]/webapps

        _

      • Restart your webapps (Tomcat/Jetty/Resin)

    Manually Installing/Updating GeoLite Database File

    ...

    The GeoLite Database file (at \ [dspace\]/config/GeoLiteCity.dat) is used by the [DSpace Statistics|#DSpace Statistics] engine to generate location/country based reports. (_Note: If you are not using DSpace Statistics, this file is not needed._)

    In most cases, this file is installed automatically when you run ant fresh_install. However, if the file cannot be downloaded & installed automatically, you may need to manually install it.

    ...

    You have two options to install/update this file:

    ...

    1. Attempt

      to

      re-run

      the

      automatic

      installer

      from

      your

      DSpace

      Source

      Directory

      (

      \

      [dspace-source

      \

      ]).

      This

      will

      attempt

      to

      automatically

      download

      the

      database

      file,

      unzip

      it

      and

      install

      it

      into

      the

      proper

      location:

      Code Block
      ant update_geolite
      • Wiki MarkupNOTE: If the location of the GeoLite Database file is known to have changed, you can also run this auto-installer by passing it the new URL of the GeoLite Database File: {{ant \ -Dgeolite=\[full-URL-of-geolite\] update_geolite}}
    2. OR, you can manually install the file by performing these steps yourself:

    Windows Installation

    Pre-requisite Software

    ...

    1. Download the DSpace source from SourceForge and unzip it (WinZip will do this)
    2. Ensure the PostgreSQL service is running, and then run pgAdmin III (Start -> PostgreSQL 8.0 -> pgAdmin III). Connect to the local database as the postgres user and:
      • Create a 'Login Role' (user) called dspace with the password dspace
      • Create a database called dspace owned by the user dspace, with UTF-8 encoding
    3. Wiki MarkupUpdate paths in _\[dspace-source\]\dspace\config\dspace.cfg_
      • Note: Use forward slashes / for path separators, though you can still use drive letters, e.g.: dspace.dir = C:/DSpaceAlso, make sure you change all of the parameters with file paths to suit, specifically:

        Code Block
        dspace.dir
        config.template.log4j.properties
        config.template.log4j-handle-plugin.properties
        config.template.oaicat.properties
        assetstore.dir
        log.dir
        upload.temp.dir
        report.dir
        handle.dir
    4. Create the directory for the DSpace installation (e.g. C:/DSpace)
    5. Generate the DSpace installation package by running the following from command line (cmd) :

      Code Block
      
      cd [dspace-source]/dspace/
      mvn package
      
      • Wiki Markup_Note #1:_ This will generate the DSpace installation package in your _\[dspace-source\]/dspace/target/dspace-\[version\]-build/_ directory.
      • Note #2:Without any extra arguments, the DSpace installation package is initialized for PostgreSQL. If you want to use Oracle instead, you should build the DSpace installation package as follows:

        Code Block
        mvn -Ddb.name=oracle package
    6. Wiki Markup

      Initialize

      the

      DSpace

      database

      and

      install

      DSpace

      to

      _\

      [dspace

      \

      ]

      _

      (e.g.

      _

      C:\DSpace

      _

      )

      by

      running

      the

      following

      from

      command

      line

      from

      your

      _\

      [dspace-source

      \

      ]/dspace/target/dspace-

      \

      [version

      \

      ]-build/

      _

      directory:

      Code Block
      ant fresh_install
      • Note: to see a complete list of build targets, run: ant help
      unmigrated-wiki-markup
    7. Create

      an

      administrator

      account,

      by

      running

      the

      following

      from

      your

      _\

      [dspace

      \

      ]

      _

      (e.g.

      _

      C:\DSpace

      _

      )

      directory:

      Code Block
      [dspace]\bin\dspace create-administrator
      Wiki Markup
    8. Copy the Web application directories from _\[dspace\]\webapps_ to Tomcat's webapps dir, which should be somewhere like _C:\Program Files\Apache Software Foundation\Tomcat\webapps_
        unmigrated-wiki-markup
      • Alternatively,

        Tell

        your

        Tomcat

        installation

        where

        to

        find

        your

        DSpace

        web

        application(s).

        As

        an

        example,

        in

        the

        _

        <Host>

        _

        section

        of

        your

        _\

        [tomcat

        \

        ]/conf/server.xml

        _

        you

        could

        add

        lines

        similar

        to

        the

        following

        (but

        replace

        _\

        [dspace

        \

        ]

        _

        with

        your

        installation

        location):

        Code Block
        
        <!-- DEFINE A CONTEXT PATH FOR DSpace XML User Interface  -->
        <Context path="/xmlui" docBase="[dspace]/webapps/xmlui" debug="0"
        	reloadable="true" cachingAllowed="false"
        	allowLinking="true"/>
        
        <!-- DEFINE A CONTEXT PATH FOR DSpace JSP User Interface  -->
        <Context path="/jspui" docBase="[dspace]/webapps/jspui" debug="0"
        	reloadable="true" cachingAllowed="false"
        	allowLinking="true"/>
        
        <!-- DEFINE A CONTEXT PATH FOR DSpace OAI User Interface  -->
        <Context path="/oai" docBase="[dspace]/webapps/oai" debug="0"
        	reloadable="true" cachingAllowed="false"
        	allowLinking="true"/>
        
        <!-- DEFINE ADDITIONAL CONTEXT PATHS FOR OTHER DSPACE WEB APPLICATIONS (SOLR, SWORD, LNI, etc.).
             CHANGE THE VALUE OF "[app]" FOR EACH APPLICATION YOU WISH TO ADD -->
        <Context path="/[app]" docbase="[dspace]/webapps/[app]" debug="0"
        	reloadable="true" cachingAllowed="false"
        	allowLinking="true"/>
        
    9. Start the Tomcat service
    10. Browse to either http://localhost:8080/jspui or http://localhost:8080/xmlui. You should see the DSpace home page for either the JSPUI or XMLUI, respectively.

    ...

    The administrator needs to check the installation to make sure all components are working. Here is list of checks to be performed. In brackets after each item, it the associated component or components that might be the issue needing resolution.

    • Wiki MarkupSystem is up and running. _User can see the DSpace home page. \ [Tomcat/Jetty, firewall, IP assignment, DNS\]_unmigrated-wiki-markup
    • Database is running and working correctly. _Attempt to create a user, community or collection \ [PostgreSQL, Oracle\]_{_}Run the test database command to see if other issues are being report:__\[dspace\]/bin/dspace test-database_unmigrated-wiki-markup
    • Email subsystem is running. The user can issue the following command to test the email system. t attempts to send a test email to the email address that is set in dspace.cfg (mail.admin). If it fails, you will get messages informing you as to why, will refer you to the DSpace documentation. _\[dspace\]/bin/test-email_

    Known Bugs

    In any software project of the scale of DSpace, there will be bugs. Sometimes, a stable version of DSpace includes known bugs. We do not always wait until every known bug is fixed before a release. If the software is sufficiently stable and an improvement on the previous release, and the bugs are minor and have known workarounds, we release it to enable the community to take advantage of those improvements.

    ...

    • Database errors occur when you run ant fresh_install: There are two common errors that occur.
      • If your error looks like this:

        Code Block
        [java] 2004-03-25 15:17:07,730 INFO
        	    org.dspace.storage.rdbms.InitializeDatabase @ Initializing Database
        [java] 2004-03-25 15:17:08,816 FATAL
        	    org.dspace.storage.rdbms.InitializeDatabase @ Caught exception:
        [java] org.postgresql.util.PSQLException: Connection refused. Check
        	    that the hostname and port are correct and that the postmaster is
        	    accepting TCP/IP connections.
        [java]     at
        	    org.postgresql.jdbc1.AbstractJdbc1Connection.openConnection(AbstractJd
        bc1Connection.java:204)
        [java]     at org.postgresql.Driver.connect(Driver.java:139)
        Wiki Markup

        it

        usually

        means

        you

        haven't

        yet

        added

        the

        relevant

        configuration

        parameter

        to

        your

        PostgreSQL

        configuration

        (see

        above),

        or

        perhaps

        you

        haven't

        restarted

        PostgreSQL

        after

        making

        the

        change.

        Also,

        make

        sure

        that

        the

        _

        db.username

        _

        and

        _

        db.password

        _

        properties

        are

        correctly

        set

        in

        _\

        [dspace

        \

        ]/config/dspace.cfg

        _

        .

        An

        easy

        way

        to

        check

        that

        your

        DB

        is

        working

        OK

        over

        TCP/IP

        is

        to

        try

        this

        on

        the

        command

        line:

        Code Block
        
        psql -U dspace -W -h localhost

        Enter the dspace database password, and you should be dropped into the psql tool with a dspace=> prompt.

      • Another common error looks like this:

        Code Block
        [java] 2004-03-25 16:37:16,757 INFO
        	    org.dspace.storage.rdbms.InitializeDatabase @ Initializing Database
        [java] 2004-03-25 16:37:17,139 WARN
        	    org.dspace.storage.rdbms.DatabaseManager @ Exception initializing DB
        	    pool
        [java] java.lang.ClassNotFoundException: org.postgresql.Driver
        [java]     at java.net.URLClassLoader$1.run(URLClassLoader.java:198)
        [java]     at java.security.AccessController.doPrivileged(Native
        	   Method)
        [java]     at
        	   java.net.URLClassLoader.findClass(URLClassLoader.java:186)
        Wiki Markup

        This

        means

        that

        the

        PostgreSQL

        JDBC

        driver

        is

        not

        present

        in

        _\

        [dspace

        \

        ]/lib

        _

        .

        See

        above.

    • GeoLiteCity Database file fails to download or install, when you run ant fresh_install: There are two common errors that may occur:
      • If your error looks like this:

        Code Block
        [get] Error getting http://geolite.maxmind.com/download/geoip/database/GeoLiteCity.dat.gz to /usr/local/dspace/config/GeoLiteCity.dat.gz
        
        BUILD FAILED
        /dspace-release/dspace/target/dspace-1.8.0-build/build.xml:931: java.net.ConnectException: Connection timed out
        

        it means that you likely either (a) don't have an internet connection to download the necessary GeoLite Database file (used for DSpace Statistics), or (b) the GeoLite Database file's URL is no longer valid. You should be able to resolve this issue by following the "Manually Installing/Updating GeoLite Database File" instructions above.

      • Another common message looks like this:

        Code Block
        [echo] WARNING : FAILED TO DOWNLOAD GEOLITE DATABASE FILE
        [echo]          (Used for DSpace Solr Usage Statistics)

        Again, this means the GeoLite Database file cannot be downloaded or is unavailable for some reason. You should be able to resolve this issue by following the "Manually Installing/Updating GeoLite Database File" instructions above.

    General DSpace Issues

    • Tomcat doesn't shut down: If you're trying to tweak Tomcat's configuration but nothing seems to make a difference to the error you're seeing, you might find that Tomcat hasn't been shutting down properly, perhaps because it's waiting for a stale connection to close gracefully which won't happen.
      • To see if this is the case, try running: ps -ef | grep java and look for Tomcat's Java processes. If they stay around after running Tomcat's shutdown.sh script, trying running kill on them (or kill -9 if necessary), then starting Tomcat again.
    • Database connections don't work, or accessing DSpace takes forever: If you find that when you try to access a DSpace Web page and your browser sits there connecting, or if the database connections fail, you might find that a 'zombie' database connection is hanging around preventing normal operation.
      • To see if this is the case, try running: ps -ef | grep postgres
      • You might see some processes like this:

        Code Block
        dspace 16325  1997  0  Feb 14  ?         0:00 postgres: dspace dspace    127.0.0.1 idle in transaction

        This is normal. DSpace maintains a 'pool' of open database connections, which are re-used to avoid the overhead of constantly opening and closing connections. If they're 'idle' it's OK; they're waiting to be used.

      • However sometimes, if something went wrong, they might be stuck in the middle of a query, which seems to prevent other connections from operating, e.g.:

        Code Block
        dspace 16325  1997  0  Feb 14  ?         0:00 postgres: dspace dspace    127.0.0.1 SELECT

        This means the connection is in the middle of a SELECT operation, and if you're not using DSpace right that instant, it's probably a 'zombie' connection. If this is the case, try running kill on the process, and stopping and restarting Tomcat.