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This page is a catalog of known applications, and tools that are= provided and maintained by members of the VIVO community through open sour= ce projects, to support/enhance your VIVO implementation. You are encourage= d participate in these projects. If you are working on an open source appli= cation or tool, and you wish to share it with the community, you are encour= aged to add it here.
If you have a VIVO related project that you wish to share with the commu= nity, you can create a project page for it on this Wiki, and it will be aut= omatically included in this table, providing it has the following:
There is a page template that provides this for you. When creating a pag= e, simply choose "VIVO Community Project Page" as the template, and the wik= i will give you the basic structure of a project page.
If there are any problems with the contents of this list, or you require= any assistance in creating a project page, please email vivo-t= ech@googlegroups.com .
Add a project to the ca= talog
Title | Description | Type | License | Language | Owner | Team | Location | Status | |
---|---|---|---|---|---|---|---|---|---|
DSpace-VIVO | Integration between DSpace and VIVO platforms | ingest, integration | Java |
Lyrasis |
https://github.com/vivo-community/DSpace-VIVO= a> |
PROOF OF CONC= EPT |
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Dynamic API | Implementation of Dynamic API into Vitro|VIVO | Architecture | Java |
DRA=
FT
|
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OpenHarvester | Harvest data from open APIs for individuals, includes claiming interfac= e and production of triples for VIVO | ingest | Java, JavaFX | Muhammad Javed | Muhammad Javed | https://github.com/mjaved495/OpenHarvester |
PROOF OF CONC= EPT |
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Advanced role management | Advanced role management | administration | Java | TIB | tba |
DRA=
FT
|
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share2vivo | Harvest data from SHARE, import to VIVO | ingest | Python |
Alexander Garcia Castro, Mike Conlon |
Alexander Garcia Castro, Mike Conlon |
https://github.com/alexgarciac/share2vivo-cli= a> |
AVAILABLE= span> |
||
VIVO Pump | Command line software for managing VIVO data using spreadsheets | ingest | Apache 2 | Python | Mike Conlon | Mike Conlon, Chris Barnes | https://github.com/mconlon17/vivo-pump | BETA | |
VIVO RDFLIB Sparqlstore | vivo-rdflib-sp= arqlstore |
Data | MIT | Python | Ted Lawless | https://github.com/lawlesst/vivo-rdflib-s= parqlstore |
AVAILABLE= span> |
||
Link Checker | Link Checker reports on status of web links in a VIVO | data management | BSD-3 | python | Mike Conlon | https://github.com/mconlon17/vivo-link-checker= | 2014 | ||
ReCiter | ReCiter is a tool for disambiguating authors in publications | ingest | Apache-2 | Java | Paul Albert | https://github.com/wcmc-its/ReCiter | DRAFT | ||
VIVO Photo Data Generator | Command line to bulk load images to VIVO | ingest | Java | Muhammad Javed | https://github.com/mjaved495/VIVOPhotoDat= aGenerator | DRAFT | |||
CTSASearch | Multisite CTSA search that includes = VIVO and other profiling systems |
Discovery | Dave Eichmann | http://research.icts.uiowa.edu/polyglot/ | AVAILABLE<= /span> | ||||
VIVO Searchlight | Browser bookmarklet for finding people across VIVO sites based on= the content of the page you are on. | Discovery | Miles Worthington | http://vivosearchlight.org/ =E2=80=93 404 now |
DRAFT | ||||
Facetview | Facetview page using elasticsearch to display vivo people and research<= /td> | theme, search | ? | python, sparql, javascript | Don Elsborg | https://github.com/tetherless-world/dco= -elasticsearch CU Boulder has a private repo, unavco also has a fork | production | ||
VIVO Visualization Library | A simple Ruby on Rails application to show examples of visualizat= ions that are created with data from VIVO | Data Visualization | WTFPL - https://en.wikipedia.org/wiki/WTFPL | Ruby | Paul Friedman | Paul Friedman | https://github.com/NUBIC/vivo-vl | BETA<= /td> | |
dchecker | Data integrity checking software for VIVO. | Data management | BSD 3-Clause | Python | Nicholas Rejack | https://github.com/nrejack/dchecker | AVAILABLE<= /span> | ||
URI Tool | Merge URI in a VIVO from a web interface | Data management | perl | https://github.com/vsposato/uri-tool | AVAILABLE<= /span> | ||||
ORNG Gadgets | Cross-platform plugins for VIVO and Profiles RNS, used at several= institutions. Apps library includes free apps written by Baylor, UCSF, Kno= de Inc., etc. | Reuse |
Java | Eric Meeks | http://www.orng.info/ | AVAILABLE<= /span> | |||
UCSF developer portal | Standalone website for on-campus dev= elopers documents and evangelizes reuse of RNS data. |
Outreach | Anirvan Chatterjee | http://opendata.profiles.ucsf.edu/json-v2.html= | AVAILABLE<= /span> | ||||
Digital Vita Docs for VIVO | Generate CV and Biosketch documents from VIVO | Reuse | University of Pittsburgh | https://github.com/vivo-project/vivo-dvdocs= td> | BETA<= /td> | ||||
VIVO Widgets | Produces JSON and JSONP feeds for or= ganizations and individual people. Does this quickly using a dedicated Solr= index |
Reuse | Scala | Richard Outten | Jim Wood | https://github.com/OIT-ADS-Web/vivo_widgets= td> | AVAILABLE<= /span> | ||
Karma | Data integration tool | Ingest | Pedro Szekely | Violeta Ilik | http://isi.edu/integration/karma/ | DRAFT | |||
R Toolkit (for VIVO) | Tools for making VIVO visualizations= with R |
Visualization | MIT | R | Mike Conlon | Mike Conlon | http://github.com/mconlon17/vivo-r | AVAILABLE<= /span> | |
NIH Biosketch Generator | Make an NIH Biosketch from a VIVO URI | Output | BSD | Python | Mike Conlon | Mike Conlon | https://github.com/mconlon17/vivo-biosk= etch-generator | AVAILABLE<= /span> | |
Triple Inspector | View triples for VIVO entities | Utility | BSD | Javascript | Mike Conlon | Mike Conlon | https://github.com/mconlon17/vivo-triple-i= nspector | AVAILABLE<= /span> | |
Wordpress plugin for VIVO | Create business card type display of= VIVO data on WordPress pages |
Reuse | BSD | PHP | Chris Barnes | UF CTSIT | https://github.com/ctsit/wordpress-vivo-card/= a> | AVAILABLE<= /span> | |
Open Refine | Data tools for VIVO based on Google = Refine |
Eliza Chan | AVAILABLE<= /span> | ||||||
VIVO Vagrant | A quick way to get a VIVO instance running on your machine. | Quick start | Vagrant, Bash | Ted Lawless | Multiple | https://github.com/lawlesst/vivo-vagrant | AVAILABLE<= /span> | Like: 1 | |
orcid2vivo | For retrieving data from the O= RCID API and crosswalking to VIVO-ISF. | Ingest | MIT | Python | Justin Littman | GWU | https://github.com/gwu-libraries/orcid2vivo= td> | AVAILABLE<= /span> | Like: 1 |
Linked Data Import | Drupal 7 module for importing linked= data into Drupal. Works nicely with VIVO data, no SPARQL endpoint necessar= y. |
Reuse | PHP | Miles Worthington | https://github.com/milesw/ldimport | AVAILABLE<= /span> | |||
VIVO2NotLD | Tools to convert RDF that conforms t= o the VIVO-ISF Ontology to a more simplified form |
Export | MIT | Python | Justin Littman | GWU | https://github.com/gwu-libraries/vivo2notld= td> | AVAILABLE<= /span> | |
Docker for VIVO | VIVO and Docker for deployment | DevOps | MIT | Docker, Python | Justin Littman | GWU | https://github.com/gwu-libraries/vivo-docker= | AVAILABLE<= /span> |