Deprecated. This material represents early efforts and may be of interest to historians. It doe not describe current VIVO efforts.
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note|Some of the content on this page refers to VIVO 1.2 and earlier releases. Please see VIVO v1.3 VirtualBox Appliance for additional information.
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Tomcat runs on port 8080. To browse from the host machine, after installing the machine, you will have to run the following commands in a console.
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VBoxManage setextradata <guestname> "VBoxInternal/Devices/pcnet/0/LUN#0/Config/apache/HostPort" 8080
VBoxManage setextradata <guestname> "VBoxInternal/Devices/pcnet/0/LUN#0/Config/apache/GuestPort" 8080
VBoxManage setextradata <guestname> "VBoxInternal/Devices/pcnet/0/LUN#0/Config/apache/Protocol" TCP
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To map host port 2222 (for example) to guest port 22, run the following commands in a console, replacing <guestname> with the name of your appliance (by default vivo-rel-1.2-vm):
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VBoxManage setextradata <guestname> "VBoxInternal/Devices/pcnet/0/LUN#0/Config/ssh/HostPort" 2222
VBoxManage setextradata <guestname> "VBoxInternal/Devices/pcnet/0/LUN#0/Config/ssh/GuestPort" 22
VBoxManage setextradata <guestname> "VBoxInternal/Devices/pcnet/0/LUN#0/Config/ssh/Protocol" TCP
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Then you can ssh into the appliance using the following command:
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ssh -l vitro -p 2222 localhost
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From the host computer, you can copy files to the virtual appliance as follows:
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scp -P 2222 <filename> vitro@localhost:<Destination>
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A convenient bash script for those who find themselves reinstalling the virtual appliance repeatedly is this:
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VBoxManage setextradata $1 "VBoxInternal/Devices/pcnet/0/LUN#0/Config/apache/HostPort" 8080
VBoxManage setextradata $1 "VBoxInternal/Devices/pcnet/0/LUN#0/Config/apache/GuestPort" 8080
VBoxManage setextradata $1 "VBoxInternal/Devices/pcnet/0/LUN#0/Config/apache/Protocol" TCP
VBoxManage setextradata $1 "VBoxInternal/Devices/pcnet/0/LUN#0/Config/ssh/HostPort" 2222
VBoxManage setextradata $1 "VBoxInternal/Devices/pcnet/0/LUN#0/Config/ssh/GuestPort" 22
VBoxManage setextradata $1 "VBoxInternal/Devices/pcnet/0/LUN#0/Config/ssh/Protocol" TCP
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The log files catalina.out and vivo.all.log are not in the same folder (as is the case with some VIVO installations). Their locations are:
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/var/log/tomcat6/catalina.out
/usr/share/tomcat6/logs/vivo.all.log
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