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DSpace System Documentation: Installation

Table of Contents
minLevel2
outlinetrue
stylenone

For the Impatient

Since some users might want to get their test version up and running as fast as possible, offered below is an unsupported outline of getting DSpace to run quickly in a Unix-based environment using the DSpace source release.

Warning

Only experienced unix admins should even attempt the following without going to the detailed Installation Instructions

Code Block

useradd -m dspace
gunzip -c dspace-1.x-src-release.tar.gz | tar -xf -
createuser -U postgres -d -A -P dspace
createdb -U dspace -E UNICODE dspace
cd [dspace-source]/dspace/config
vi dspace.cfg
mkdir [dspace]
chown dspace [dspace]
su - dspace
cd [dspace-source]/dspace
mvn package
cd [dspace-source]/dspace/target/dspace-<version>-build.dir
ant fresh_install
cp -r [dspace]/webapps/* [tomcat]/webapps
/etc/init.d/tomcat start
[dspace]/bin/dspace create-administrator

...

  • UNIX-like OS (Linux, HP/UX, Mac OSX, etc.) : Many distributions of Linux/Unix come with some of the dependencies below pre-installed or easily installed via updates, you should consult your particular distributions documentation or local system administrators to determine what is already available.
  • Microsoft Windows: After verifying all prerequisites below, see the Windows Installation section for Windows tailored instructions

Oracle Java JDK 6

...

(standard SDK is fine, you don't need J2EE)

DSpace now requires Oracle Java 6 or greater because of usage of new language capabilities introduced in 5 and 6 that make coding easier and cleaner.(standard SDK is fine, you don't need J2EE). Please note, at this time, DSpace does not function properly with Java JDK 7 (see warning below).

Oracle's Java can be downloaded from the following location: http://javawww.sunoracle.com/technetwork/java/javase/downloads/index.jspOnly Oracle's Java has been tested with each release and is known to .html. Again, you can just download the Java SE JDK version.

Warning
titleJava 7 is currently unsupported

DSpace does not currently support Java 7, as there is a known issue with Java 7 and Lucene/SOLR (which DSpace uses for search & browse functionality). For more details, see this article on the Apache site: "WARNING: Index corruption and crashes in Apache Lucene Core / Apache Solr with Java 7" as well as this Java bug report: 7073868

Note
titleOther flavors of Java may cause issues

Only Oracle's Java has been tested with each release and is known to work correctly. Other flavors of Java may pose problems.

Apache Maven 2.2.x or higher (Java build tool)

Note
titleKnown issue with Maven 2.0.x and Maven 3.x and DSpace 1.7.x requires usage of Maven 2.2.x

DSpace 1.7.x required usage of Maven 2.2.x does , as it did not build properly when using Maven 2.0.x or Maven 3.x. This is was a known issue . The quick fix is to use Maven 2.2.x. More information on this issue can be found in the following JIRA issue: (see DS-788). However, DSpace 1.8.x does build resolved this issue so that DSpace now builds properly with Maven 32.02.x .

...

or above.

Maven is necessary in the first stage of the build process to assemble the installation package for your DSpace instance. It gives you the flexibility to customize DSpace using the existing Maven projects found in the _\[dspace-source\]/dspace/modules_ directory or by adding in your own Maven project to build the installation package for DSpace, and apply any custom interface "overlay" changes.

Maven can be downloaded from the following location: http://maven.apache.org/download.html

...

Apache Ant 1.8 or later (Java build tool)

Wiki MarkupApache Ant is still required for the second stage of the build process. It is used once the installation package has been constructed in _\[dspace-source\]/dspace/target/dspace-<version>-build.dir_ and still uses some of the familiar ant build targets found in the 1.4.x build process.

Ant can be downloaded from the following location: http://ant.apache.org

Relational Database

...

(PostgreSQL or Oracle)

...

  • PostgreSQL 8.2 3 to 8.4 PostgreSQL can be downloaded from the following location: http://www.postgresql.org/ . It is highly recommended that you try to work with Postgres 8.4 or greater, however , 8.2 or greater 3 should still work. Unicode (specifically UTF-8) support must be enabled. This is enabled by default in 8.0+. Once installed, you need to enable TCP/IP connections (DSpace uses JDBC). In postgresql.conf: uncomment the line starting: listen_addresses = 'localhost'. Then tighten up security a bit by editing pg_hba.conf and adding this line: host dspace dspace 127.0.0.1 255.255.255.255 md5. Then restart PostgreSQL.
  • Oracle 10g or greater Details on acquiring Oracle can be downloaded from the following location: http://www.oracle.com/database/. You will need to create a database for DSpace. Make sure that the character set is one of the Unicode character sets. DSpace uses UTF-8 natively, and it is suggested that the Oracle database use the same character set. You will also need to create a user account for DSpace (e.g. dspace) and ensure that it has permissions to add and remove tables in the database. Refer to the Quick Installation for more details.
    • NOTE: If the database server is not on the same machine as DSpace, you must install the Oracle client to the DSpace server and point tnsnames.ora and listener.ora files to the database the Oracle server.
    • NOTE: DSpace uses sequences to generate unique object IDs — beware Oracle sequences, which are said to lose their values DSpace uses sequences to generate unique object IDs — beware Oracle sequences, which are said to lose their values when doing a database export/import, say restoring from a backup. Be sure to run the script etc/update-sequences.sql after importing.
    • For people interested in switching from Postgres to Oracle, I know of no tools that would do this automatically. You will need to recreate the community, collection, and eperson structure in the Oracle system, and then use the item export and import tools to move your content over.

Servlet Engine

...

(Apache Tomcat 5.5 or 6, Jetty, Caucho Resin or equivalent)

...

  • Apache Tomcat 5.5 or later. Tomcat can be downloaded from the following location: http://tomcat.apache.org.
    • Note that DSpace will need to run as the same user as Tomcat, so you might want to install and run Tomcat as a user called 'dspace'. Set the environment variable TOMCAT_USER appropriately.
    • You need to ensure that Tomcat has a) enough memory to run DSpace and b) uses UTF-8 as its default file encoding for international character support. So ensure in your startup scripts (etc) that the following environment variable is set: JAVA_OPTS="-Xmx512M -Xms64M -Dfile.encoding=UTF-8"
    • Wiki Markup*

      Modifications

      in

      * *_\

      [tomcat

      \

      ]/conf/server.xml

      {_}*

      :

      You

      also

      need

      to

      alter

      Tomcat's

      default

      configuration

      to

      support

      searching

      and

      browsing

      of

      multi-byte

      UTF-8

      correctly.

      You

      need

      to

      add

      a

      configuration

      option

      to

      the

      _

      <Connector>

      _

      element

      in

      _\

      [tomcat

      \

      ]/config/server.xml

      _

      :

      _

      URIEncoding="UTF-8"

      _

      e.g.

      if

      you're

      using

      the

      default

      Tomcat

      config,

      it

      should

      read:

      Code Block
      
      <!-- Define a non-SSL HTTP/1.1 Connector on port 8080 -->
      <Connector port="8080"
                    maxThreads="150"
                    minSpareThreads="25"
      	      maxSpareThreads="75"
                    enableLookups="false"
                    redirectPort="8443"
      	      acceptCount="100"
                    connectionTimeout="20000"
      	      disableUploadTimeout="true"
                    URIEncoding="UTF-8"/>
      

      You may change the port from 8080 by editing it in the file above, and by setting the variable CONNECTOR_PORT in server.xml.

  • Jetty or Caucho Resin DSpace will also run on an equivalent servlet Engine, such as Jetty (http://www.mortbay.org/jetty/index.html) or Caucho Resin (http://www.caucho.com/). Jetty and Resin are configured for correct handling of UTF-8 by default.

...

Perl (only required for [dspace]/bin/dspace-info.pl)

Installation Instructions

...

It is important to note that the strategies are identical in terms of the list of procedures required to complete the build process, the only difference being that the Source Release includes "more modules" that will be built given their presence in the distribution package.

  • Default Binary Release (dspace-<version>-release.zip)
    • This distribution will be adequate for most cases of running a DSpace instance. It is intended to be the quickest way to get DSpace installed and running while still allowing for customization of the themes and branding of your DSpace instance.
    • This method allows you to customize DSpace configurations (in dspace.cfg) or user interfaces, using basic pre-built interface "overlays".
    • It downloads "precompiled" libraries for the core dspace-api, supporting servlets, taglibraries, aspects and themes for the dspace-xmlui, dspace-xmlui and other webservice/applications.
    • This approach only exposes the selected parts of the application that the DSpace committers would prefer to see customizedfor customization. All other modules are downloaded from the 'Maven Central Repository' The directory structure for this release is the following:
      • Wiki Markup_\[dspace-source\]_
        • dspace/ - DSpace 'build' and configuration module
        • pom.xml - DSpace Parent Project definition
  • Source Release (dspace-<version>-src-release.zip)
    • This method is recommended for those who wish to develop DSpace further or alter its underlying capabilities to a greater degree.
    • It contains all dspace code for the core dspace-api, supporting servlets, taglibraries, aspects and themes for Manakin (dspace-xmlui), and other webservice/applications.
    • Provides all the same capabilities as the normal binary release. The directory structure for this release is more detailed:unmigrated-wiki-markup
      • _\[dspace-source\]_
        • dspace/ - DSpace 'build' and configuration module
        • dspace-api/ - Java API source module
        • dspace-discovery - Discovery source module
        • dspace-jspui/ - JSP-UI source module
        • dspace-oai - OAI-PMH source module
        • dspace-xmlui - XML-UI (Manakin) source module
        • dspace-lni - Lightweight Network Interface source module
        • dspace-stats - Statistics source module
        • dspace-sword - SWORD (Simple Web-serve Offering Repository Deposit) deposit service source module
        • dspace-test – DSpace Tests (Unit and Integration Tests)-swordv2 - SWORDv2 source module
        • dspace-sword-client - XMLUI client for SWORD
        • pom.xml - DSpace Parent Project definition

...

DSpace uses three separate directory trees. Although you don't need to know all the details of them in order to install DSpace, you do need to know they exist and also know how they're referred to in this document:

  1. Wiki Markup*The installation directory*, referred to as {{\[[dspace\]}}. This is the location where DSpace is installed and running off of it is the location that gets defined in the {{dspace.cfg}} as "dspace.dir". It is where all the DSpace configuration files, command line scripts, documentation and webapps will be installed to.unmigrated-wiki-markup
  2. *The source directory*, referred to as {{\[dspace-source\]}} . This is the location where the DSpace release distribution has been unzipped into. It usually has the name of the archive that you expanded such as {{dspace}}\-{{<version>}}\-{{release}} or {{dspace}}\-{{<version>}}\-{{src}}\-{{release}}. It is the directory where all of your "build" commands will be run. or dspace-<version>-src-release. Normally it is the directory where all of your "build" commands will be run. 
  3. The web deployment directory. This is the directory that contains your DSpace web Wiki Markup*The web deployment directory*. This is the directory that contains your DSpace web application(s). In DSpace 1.5.x and above, this corresponds to {{\[dspace\]/webapps}} by default. However, if you are using Tomcat, you may decide to copy your DSpace web applications from {{\[dspace\]/webapps/}} to {{\[tomcat\]/webapps/}} (with {{\[tomcat\]}} being wherever you installed Tomcat‚ also known as {{$CATALINA_HOME}}).
    For details on the contents of these separate directory trees, refer to directories.html. _Note that the_ {{\[dspace-source\]}} _and_ {{\[dspace\]}} _directories are always separate\!_

Installation

This method gets you up and running with DSpace quickly and easily. It is identical in both the Default Release and Source Release distributions.

  1. Create the DSpace user. This needs to be the same user that Tomcat (or Jetty etc.) will run as. e.g. as rootrun:

    Code Block
    useradd -m dspace
  2. Download the latest DSpace release There are two version available with each release of DSpace: (dspace-1.x-release. and dspace-1.x-src-release.xxx); you only need to choose one. If you want a copy of all underlying Java source code, you should download the dspace-1.x-src-release.xxx Within each version, you have a choice of compressed file format. Choose the one that best fits your environment.
  3. Unpack the DSpace software. After downloading the software, based on the compression file format, choose one of the following methods to unpack your software:
    1. Zip file. If you downloaded dspace-1.

      6

      8-release.zipdo the following:

      Code Block
      unzip dspace-1.78-release.zip
    2. .gz file. If you downloaded dspace-1.

      6

      8-release.tar.gzdo the following:

      Code Block
      gunzip -c dspace-1.78-release.tar.gz | tar -xf -
    3. .bz2 file. If you downloaded _dspace-1.

      6

      8-release.tar.bz2_do the following:

      Code Block
      bunzip2 dspace-1.78-release.tar.bz | tar -xf -
      Wiki Markup

      For

      ease

      of

      reference,

      we

      will

      refer

      to

      the

      location

      of

      this

      unzipped

      version

      of

      the

      DSpace

      release

      as

      _\

      [dspace-source

      \

      ]

      _

      in

      the

      remainder

      of

      these

      instructions.

      After

      unpacking

      the

      file,

      the

      user

      may

      which

      to

      change

      the

      ownership

      of

      the

      _

      dspace-1.6-release

      _

      to

      the

      'dspace'

      user.

      (And

      you

      may

      need

      to

      change

      the

      group).

  4. Database Setup
    • Also see notes above
    • PostgreSQL:
      • A PostgreSQL JDBC driver is configured as part of the default DSpace build. You no longer need to copy any PostgreSQL jars to get PostgreSQL installed.
      • Create a dspace database user. This is entirely separate from the dspaceoperating-system user created above.

        Code Block
        createuser -U postgres -d -A -P dspace

        You will be prompted for the password of the PostgreSQL superuser (postgres). Then you'll be prompted (twice) for a password for the new dspace user.

      • Create a dspace

        }}

        database, owned by the

        {{

        dspace PostgreSQL user (you are still logged in at 'root'):

        Code Block
        createuser -U postgres -d -A -P dspace 
        createdb -U dspace -E UNICODE dspace

        You will be prompted for

        a

        the password

        for

        of the DSpace database user. (This isn't the same as the dspace user's UNIX password.)

    • Oracle:
      • Setting up

        oracle

        DSpace to use Oracle is a bit different now. You will need still need to get a

        Copy

        copy of the

        oracle

        Oracle JDBC driver, but instead of copying it into

        a

        the lib directory you will need to install it into your local Maven repository. (You'll need to download it first from this location: http://www.oracle.com/technetwork/database/enterprise-edition/jdbc-112010-090769.html.) Run the following command (all on one line):

        Code Block
        mvn install:install-file
            -Dfile=ojdbc6.jar
            -DgroupId=com.oracle
            -DartifactId=ojdbc6
            -Dversion=11.2.0.2.03
            -Dpackaging=jar
            -DgeneratePom=true
        
      • You need to compile DSpace with an Oracle driver (ojdbc6.jar) corresponding to your Oracle version - update the version in [dspace-source]/pom.xmlE.g.:

        Code Block
        <dependency>
          <groupId>com.oracle</groupId>
          <artifactId>ojdbc6</artifactId>
          <version>11.2.0.3</version>
        </dependency>
        
      • Create a database for DSpace. Make sure that the character set is one of the Unicode character sets. DSpace uses UTF-8 natively, and it is required that the Oracle database use the same character set. Create a user account for DSpace (e.g. dspace,) and ensure that it has permissions to add and remove tables in the database.
      • Wiki Markup

        Edit

        the

        _\

        [dspace-source

        \

        ]/dspace/config/dspace.cfg

        _

        database

        settings:

        Code Block
        
        db.name   = oracle
        db.urldriver   = oracle.jdbc.OracleDriver
        db.url = jdbc:oracle:thin:@//host@host:port/dspace
        db.driver = oracle.jdbc.OracleDriver
        SID
        

        Where SID is the SID of your database defined in tnsnames.ora, default Oracle port is 1521.
        Alternatively, you can use a full SID definition, e.g.:

        Code Block
        db.url = jdbc:oracle:thin:@(description=(address_list=(address=(protocol=TCP)(host=localhost)(port=1521)))(connect_data=(service_name=DSPACE)))
        

        Also set the username and password of the database you created in step 3:

        Code Block
        db.username = your_oracle_username
        db.password = your_oracle_password
        
  5. Initial Configuration: Edit [dspace-source]/dspace/config/dspace.cfg, in particular you'll need to set these properties:
    • dspace.dir - must be set to the [dspace] (installation)
    Wiki Markup
    *Initial Configuration:* Edit {{\[dspace-source\]/dspace/config/dspace.cfg}}, in particular you'll need to set these properties:
    • Wiki Markup{{dspace.dir}} \- must be set to the _\[dspace\]_ (installation) directory.
    • dspace.url - complete URL of this server's DSpace home page.
    • dspace.hostname - fully-qualified domain name of web server.
    • dspace.name - "Proper" name of your server, e.g. "My Digital Library".
    • db.password - the database password you entered in the previous step.
    • mail.server - fully-qualified domain name of your outgoing mail server.
    • mail.from.address - the "From:" address to put on email sent by DSpace.
    • feedback.recipient - mailbox for feedback mail.
    • mail.admin - mailbox for DSpace site administrator.
    • alert.recipient - mailbox for server errors/alerts (not essential but very useful!)
    • registration.notify- mailbox for emails when new users register (optional)

      Info

      You can interpolate the value of one configuration variable in the value of another one. For example, to set feedback.recipient to the same value as mail.admin, the line would look like:
      feedback.recipient = ${mail.admin}
      Refer to the General Configuration section for details and examples of the above.

  6. Wiki Markup*

    DSpace

    Directory:

    *

    Create

    the

    directory

    for

    the

    DSpace

    installation

    (i.e.

    {{\

    [dspace

    \

    ]

    }}

    ).

    As

    _

    root

    _

    (or

    a

    user

    with

    appropriate

    permissions),

    run:

    Code Block
    mkdir [dspace]
    chown dspace [dspace]

    (Assuming the dspace UNIX username.)

    Wiki Markup*
  7. Installation

    Package:

    *

    As

    the

    _

    dspace

    _

    UNIX

    user,

    generate

    the

    DSpace

    installation

    package in the {{\[dspace-source\]/dspace}} directory:

    package.

    Code Block
    cd [dspace-source]/dspace/
    mvn package
    
    unmigrated-wiki-markup
    Info
    titleDefaults to PostgreSQL settings

    Without any extra arguments, the DSpace installation package is initialized for PostgreSQL. _ If you want to use Oracle instead, you should build the DSpace installation package as follows:
    mvn -Ddb.name=oracle package

    *

  8. Build

    DSpace

    and

    Initialize

    Database:

    *

    As

    the

    _

    dspace

    _

    UNIX

    user,

    initialize

    the

    DSpace

    database

    and

    install

    DSpace

    to

    {{\

    [dspace

    \

    ]

    \

    _

    }}

    :

    Code Block
    cd [dspace-source]/dspace/target/dspace-[version]-build.dir
    ant fresh_install
    Info

    To see a complete list of build targets, run: ant help The most likely thing to go wrong here is the database connection. See the Common Problems Section.

  9. Deploy Web Applications.:
    Anchor
    deployment
    deployment
    You have two choices or techniques for having Tomcat/Jetty/Resin serve up your web applications:
    • Wiki Markup_Technique A._ Simple and complete. You copy only (or all) of the DSpace Web application(s) you wish to use from the \ [dspace\]/webapps directory to the appropriate directory in your Tomcat/Jetty/Resin installation. For example: \\ {{cp \
      cp -R \ [dspace\]/webapps/\* \ [tomcat\]/webapps\*}} (This will copy all the web applications to Tomcat). \\ {{cp \
      cp -R \ [dspace\]/webapps/jspui \ [tomcat\]/webapps\*}} (This will copy only the jspui web application to Tomcat.)
    • Wiki Markup_

      Technique

      B.

      _

      Tell

      your

      Tomcat/Jetty/Resin

      installation

      where

      to

      find

      your

      DSpace

      web

      application(s).

      As

      an

      example,

      in

      the {{\<Host\}}> section of your {{\[tomcat\

      the <Host> section of your [tomcat]/conf/server.xml

      \}}

      you

      could

      add

      lines

      similar

      to

      the

      following

      (but

      replace

      {{\

      [dspace

      \

      ]

      }}

      with

      your

      installation

      location):

      Code Block
      <!-- Define the default virtual host
      	Note:  XML Schema validation will not work with Xerces 2.2.
      	-->
      	<Host name="localhost"  appBase="[dspace]/webapps"
      	....
  10. Administrator Account:Create an initial administrator account:

    Code Block
    [dspace]/bin/dspace create-administrator
  11. Initial Startup!Now the moment of truth! Start up (or restart) Tomcat/Jetty/Resin. Visit the base URL(s) of your server, depending on which DSpace web applications you want to use. You should see the DSpace home page. Congratulations! Base URLs of DSpace Web Applications:

...

Multilingual Installation

Wiki MarkupIn order to deploy a multilingual version of DSpace you have to configure two parameters in _\[dspace-source\]/config/dspace.cfg:_

  • default.locale, e.g. default.locale = en
  • webui.supported locales, e.g. webui.supported.locales = en, de

...

The following sections show how to set up the most commonly-used Java Servlet containers to support HTTP over SSL.

...

Enabling the HTTPS support in Tomcat 5.0

...

  1. For Production use: Follow this procedure to set up SSL on your server. Using a "real" server certificate ensures your users' browsers will accept it without complaints. In the examples below, $CATALINA_BASEis the directory under which your Tomcat is installed.
    1. Create a Java keystore for your server with the password changeit, and install your server certificate under the alias "tomcat". This assumes the certificate was put in the file server.pem:

      Code Block
      $JAVA_HOME/bin/keytool -import -noprompt -v -storepass changeit
      	-keystore $CATALINA_BASE/conf/keystore -alias tomcat -file
      	myserver.pem
    2. Install the CA (Certifying Authority) certificate for the CA that granted your server cert, if necessary. This assumes the server CA certificate is in ca.pem:

      Code Block
      $JAVA_HOME/bin/keytool -import -noprompt -storepass changeit
      	-trustcacerts -keystore $CATALINA_BASE/conf/keystore -alias ServerCA
      	-file ca.pem
      
    3. Optional – ONLY if you need to accept client certificates for the X.509 certificate stackable authentication module See the configuration section for instructions on enabling the X.509 authentication method. Load the keystore with the CA (certifying authority) certificates for the authorities of any clients whose certificates you wish to accept. For example, assuming the client CA certificate is in client1.pem:

      Code Block
      $JAVA_HOME/bin/keytool -import -noprompt -storepass changeit
      	-trustcacerts -keystore $CATALINA_BASE/conf/keystore  -alias client1
      	-file client1.pem
      
    4. Now add another Connector tag to your server.xmlTomcat configuration file, like the example below. The parts affecting or specific to SSL are shown in bold. (You may wish to change some details such as the port, pathnames, and keystore password)

      Code Block
      <Connector port="8443"
                     maxThreads="150" minSpareThreads="25"
      	           maxSpareThreads="75"
                     enableLookups="false"
      	           disableUploadTimeout="true"
                     acceptCount="100" debug="0"
                    scheme="https" secure="true" sslProtocol="TLS"
      	keystoreFile="conf/keystore" keystorePass="changeit" clientAuth="true" - ONLY if using client X.509 certs for authentication!
      	truststoreFile="conf/keystore" trustedstorePass="changeit" />
      

      Also, check that the default Connector is set up to redirect "secure" requests to the same port as your SSL connector, e.g.:

      Code Block
      <Connector port="8080"
                       maxThreads="150" minSpareThreads="25"
      	             maxSpareThreads="75"
                       enableLookups="false"
      	             redirectPort="8443"
                       acceptCount="100" debug="0"  	/>
      
  2. Quick-and-dirty Procedure for Testing: If you are just setting up a DSpace server for testing, or to experiment with HTTPS, then you don't need to get a real server certificate. You can create a "self-signed" certificate for testing; web browsers will issue warnings before accepting it but they will function exactly the same after that as with a "real" certificate. In the examples below, $CATALINA_BASEis the directory under which your Tomcat is installed.
    1. Optional – ONLY if you don't already have a server certificate. Follow this sub-procedure to request a new, signed server certificate from your Certifying Authority (CA):
      • Create a new key pair under the alias name "tomcat". When generating your key, give the Distinguished Name fields the appropriate values for your server and institution. CN should be the fully-qualified domain name of your server host. Here is an example:

        Code Block
        
        $JAVA_HOME/bin/keytool -genkey -alias tomcat -keyalg RSA -keysize
        	1024 \
          -keystore $CATALINA_BASE/conf/keystore -storepass changeit
        	-validity 365 \
          -dname 'CN=dspace.myuni.edu, OU=MIT Libraries, O=Massachusetts
        	Institute of Technology, L=Cambridge, S=MA, C=US'
        
      • Then, create a CSR (Certificate Signing Request) and send it to your Certifying Authority. They will send you back a signed Server Certificate. This example command creates a CSR in the file tomcat.csr

        Code Block
        
        $JAVA_HOME/bin/keytool -keystore $CATALINA_BASE/conf/keystore
        	-storepass changeit \
           -certreq -alias tomcat -v -file tomcat.csr
        
      • Before importing the signed certificate, you must have the CA's certificate in your keystore as a trusted certificate. Get their certificate, and import it with a command like this (for the example mitCA.pem):

        Code Block
        
        $JAVA_HOME/bin/keytool -keystore $CATALINA_BASE/conf/keystore
        	-storepass changeit \
             -import -alias mitCA -trustcacerts -file mitCA.pem
        
      • Finally, when you get the signed certificate from your CA, import it into the keystore with a command like the following example: (cert is in the file signed-cert.pem)

        Code Block
        
        $JAVA_HOME/bin/keytool -keystore $CATALINA_BASE/conf/keystore
        	-storepass changeit \
             -import -alias tomcat -trustcacerts -file signed-cert.pem
        

        Since you now have a signed server certificate in your keystore, you can, obviously, skip the next steps of installing a signed server certificate and the server CA's certificate.

    2. Create a Java keystore for your server with the password changeit, and install your server certificate under the alias "tomcat". This assumes the certificate was put in the file server.pem:

      Code Block
      
      $JAVA_HOME/bin/keytool -genkey -alias tomcat -keyalg RSA -keystore
      	$CATALINA_BASE/conf/keystore -storepass changeit
      

      When answering the questions to identify the certificate, be sure to respond to "First and last name" with the fully-qualified domain name of your server (e.g. test-dspace.myuni.edu). The other questions are not important.

    3. Optional – ONLY if you need to accept client certificates for the X.509 certificate stackable authentication module See the configuration section for instructions on enabling the X.509 authentication method. Load the keystore with the CA (certifying authority) certificates for the authorities of any clients whose certificates you wish to accept. For example, assuming the client CA certificate is in client1.pem:

      Code Block
      
      $JAVA_HOME/bin/keytool -import -noprompt -storepass changeit
      	-trustcacerts -keystore $CATALINA_BASE/conf/keystore  -alias client1
      	-file client1.pem
      
    4. Follow the procedure in the section above to add another Connector tag, for the HTTPS port, to your server.xml file.

...

Using SSL on Apache HTTPD with mod_jk

...

If you choose Apache HTTPD as your primary HTTP server, you can have it forward requests to the Tomcat servlet container via Apache Jakarta Tomcat Connector. This can be configured to work over SSL as well. First, you must configure Apache for SSL; for Apache 2.0 see Apache SSL/TLS Encryption for information about using mod_ssl.

If you are using X.509 Client Certificates for authentication: add these configuration options to the appropriate httpd configuration file, e.g. ssl.conf, and be sure they are in force for the virtual host and namespace locations dedicated to DSpace:

Code Block

##  SSLVerifyClient can be "optional" or
	"require"
        SSLVerifyClient optional
        SSLVerifyDepth  10
        SSLCACertificateFile
	path-to-your-client-CA-certificate
        SSLOptions StdEnvVars ExportCertData

...

A Handle server runs as a separate process that receives TCP requests from other Handle servers, and issues resolution requests to a global server or servers if a Handle entered locally does not correspond to some local content. The Handle protocol is based on TCP, so it will need to be installed on a server that can broadcast and receive TCP on port 2641.

  1. To configure your DSpace installation to run the handle server, run the following command:

    unmigrated-wiki-markup
    Code Block
    [dspace]/bin/dspace make-handle-config [dspace]/handle-server
     

    Ensure

    that

    _\

    [dspace

    \

    ]/handle-server

    _

    matches

    whatever

    you

    have

    in

    _

    dspace.cfg

    _

    for

    the

    _

    handle.dir

    _

    property.

    Wiki Markup
  2. Edit

    the

    resulting

    _\

    [dspace

    \

    ]/handle-server/config.dct

    _

    file

    to

    include

    the

    following

    lines

    in

    the

    _

    "server_config"

    _

    clause:

    Code Block
    "storage_type" = "CUSTOM"
    "storage_class" = "org.dspace.handle.HandlePlugin"
    

    This tells the Handle server to get information about individual Handles from the DSpace code.

  3. Once the configuration file has been generated, you will need to go to http://hdl.handle.net/4263537/5014 to upload the generated sitebndl.zip file. The upload page will ask you for your contact information. An administrator will then create the naming authority/prefix on the root service (known as the Global Handle Registry), and notify you when this has been completed. You will not be able to continue the handle server installation until you receive further information concerning your naming authority.
  4. Wiki MarkupWhen CNRI has sent you your naming authority prefix, you will need to edit the _config.dct_ file. The file will be found in _/\[dspace\]/handle-server_. Look for _"300:0.NA/YOUR_NAMING_AUTHORITY"_. Replace _YOUR_NAMING_AUTHORITY_ with the assigned naming authority prefix sent to you.
  5. Now start your handle server (as the dspace user):

    Code Block
    [dspace]/bin/start-handle-server

    Note that since the DSpace code manages individual Handles, administrative operations such as Handle creation and modification aren't supported by DSpace's Handle server.

Updating Existing Handle Prefixes

...

If you need to update the handle prefix on items created before the CNRI registration process you can run the _\[dspace\]/bin/dspace update-handle-prefix script_. You may need to do this if you loaded items prior to CNRI registration (e.g. setting up a demonstration system prior to migrating it to production). The script takes the current and new prefix as parameters. For example:

Code Block
[dspace]/bin/dspace update-handle-prefix 123456789 1303

...

Sitemaps allow DSpace to expose its content without the crawlers having to index every page. HTML sitemaps provide a list of all items, collections and communities in HTML format, whilst Google sitemaps provide the same information in gzipped XML format.unmigrated-wiki-markup

To generate the sitemaps, you need to run _\[dspace\]/bin/dspace generate-sitemaps_ This creates the sitemaps in _\[dspace\]/sitemaps/_

The sitemaps can be accessed from the following URLs:

Wiki MarkupWhen running _\[dspace\]/bin/dspace generate-sitemaps_ the script informs Google that the sitemaps have been updated. For this update to register correctly, you must first register your Google sitemap index page (_/dspace/sitemap_) with Google at [http://www.google.com/webmasters/sitemaps/|http://www.google.com/webmasters/sitemaps/|first register your Google sitemap index page (/dspace/sitemap) with Google at http://www.google.com/webmasters/sitemaps/]. If your DSpace server requires the use of a HTTP proxy to connect to the Internet, ensure that you have set _http.proxy.host_ and _http.proxy.port_ in _\[dspace\]/config/dspace.cfg_unmigrated-wiki-markup

The URL for pinging Google, and in future, other search engines, is configured in _\[dspace-space\]/config/dspace.cfg_ using the _sitemap.engineurls_ setting where you can provide a comma-separated list of URLs to 'ping'.

You can generate the sitemaps automatically every day using an additional cron job:

Code Block

# Generate sitemaps


0 6 * * * [dspace]/bin/dspace generate-sitemaps

...

DSpace uses the Apache Solr application underlaying the statistics. There is no need to download any separate software. All the necessary software is included. To understand all of the configuration property keys, the user should refer to DSpace Statistic Configuration for Statistics for detailed configuration information.

  1. DSpace Configuration for Accessing Solr. In the dspace.cfgfile review the following fields to make sure they are uncommented:

    Code Block
    solr.log.server = ${dspace.baseUrl}/solr/statistics
    solr.dbfile = ${dspace.dir}/config/GeoLiteCity.dat
    solr.spiderips.urls = http://iplists.com/google.txt, \
                          http://iplists.com/inktomi.txt, \
                          http://iplists.com/lycos.txt, \
                          http://iplists.com/infoseek.txt, \
                          http://iplists.com/altavista.txt, \
                          http://iplists.com/excite.txt, \
                          http://iplists.com/misc.txt, \
                          http://iplists.com/non_engines.txt
  2. DSpace logging configuration for Solr. If your DSpace instance is protected by a proxy server, in order for Solr to log the correct IP address of the user rather than of the proxy, it must be configured to look for the X-Forwarded-For header.  This feature can be enabled by ensuring the following setting is uncommented in the logging section of dspace.cfg:

    Code Block
    useProxies = true
  3. Configuration Control. In the [dspace]/config/modules/solr-statistics.cfg set file set the following property key: _statistics.item.authorization.admin=true_. This will require the user to sign on in to see that statistics. Setting the statistics to "false" will make them publicly available.
  4. Final steps.
    • Perform the following step:

      unmigrated-wiki-markup
      Code Block
      
      cd [dspace-source]/dspace
      mvn package
      cd [dspace-source]/dspace/target/dspace-<version>-build.dir
      ant -Dconfig=[dspace]/config/dspace.cfg update
      cp -R [dspace]/webapps/* [TOMCAT]/webapps
      

      If

      you

      only

      need

      to

      build

      the

      statistics,

      and

      don't

      make

      any

      changes

      to

      other

      web

      applications,

      you

      can

      replace

      the

      copy

      step

      above

      with:

      _

      cp

      \

      -R

      \

      [dspace

      \

      ]/webapps/solr

      \

      [TOMCAT

      \

      ]/webapps

      _

    • Restart your webapps (Tomcat/Jetty/Resin)

Manually Installing/Updating GeoLite Database File

...

The GeoLite Database file (at \ [dspace\]/config/GeoLiteCity.dat) is used by the [DSpace Statistics|#DSpace Statistics] engine to generate location/country based reports. (_Note: If you are not using DSpace Statistics, this file is not needed._)

In most cases, this file is installed automatically when you run ant fresh_install. However, if the file cannot be downloaded & installed automatically, you may need to manually install it.

...

You have two options to install/update this file:

  1. Wiki Markup

    Attempt

    to

    re-run

    the

    automatic

    installer

    from

    your

    DSpace

    Source

    Directory

    (

    \

    [dspace-source

    \

    ]).

    This

    will

    attempt

    to

    automatically

    download

    the

    database

    file,

    unzip

    it

    and

    install

    it

    into

    the

    proper

    location:

    Code Block
    ant update_geolite
    • Wiki MarkupNOTE: If the location of the GeoLite Database file is known to have changed, you can also run this auto-installer by passing it the new URL of the GeoLite Database File: {{ant \ -Dgeolite=\[full-URL-of-geolite\] update_geolite}}
  2. OR, you can manually install the file by performing these steps yourself:

Windows Installation

Pre-requisite Software

...

  1. Download the DSpace source from SourceForge and unzip it (WinZip will do this)
  2. Ensure the PostgreSQL service is running, and then run pgAdmin III (Start -> PostgreSQL 8.0 -> pgAdmin III). Connect to the local database as the postgres user and:
    • Create a 'Login Role' (user) called dspace with the password dspace
    • Create a database called dspace owned by the user dspace, with UTF-8 encoding
  3. Wiki MarkupUpdate paths in _\[dspace-source\]\dspace\config\dspace.cfg_
    • Note: Use forward slashes / for path separators, though you can still use drive letters, e.g.: dspace.dir = C:/DSpaceAlso, make sure you change all of the parameters with file paths to suit, specifically:

      Code Block
      dspace.dir
      config.template.log4j.properties
      config.template.log4j-handle-plugin.properties
      config.template.oaicat.properties
      assetstore.dir
      log.dir
      upload.temp.dir
      report.dir
      handle.dir
  4. Create the directory for the DSpace installation (e.g. C:/DSpace)unmigrated-wiki-markup
  5. Generate

    the

    DSpace

    installation

    package

    by

    running

    the

    following

    from

    command

    line

    (cmd) :

    Code Block
    cd  from your _\[dspace-source\]/dspace/_ directory: 
    Code Block
    mvn package
    
    • Wiki Markup_Note #1:_ This will generate the DSpace installation package in your _\[dspace-source\]/dspace/target/dspace-\[version\]-build.dir/_ directory.
    • Note #2:Without any extra arguments, the DSpace installation package is initialized for PostgreSQL. If you want to use Oracle instead, you should build the DSpace installation package as follows:

      Code Block
      mvn -Ddb.name=oracle package
    unmigrated-wiki-markup
  6. Initialize

    the

    DSpace

    database

    and

    install

    DSpace

    to

    _\

    [dspace

    \

    ]

    _

    (e.g.

    _

    C:\DSpace

    _

    )

    by

    running

    the

    following

    from

    command

    line

    from

    your

    _\

    [dspace-source

    \

    ]/dspace/target/dspace-

    \

    [version

    \

    ]-build

    .dir

    /

    _

    directory:

    Code Block
    ant fresh_install
    • Note: to see a complete list of build targets, run: ant help
  7. Wiki Markup

    Create

    an

    administrator

    account,

    by

    running

    the

    following

    from

    your

    _\

    [dspace

    \

    ]

    _

    (e.g.

    _

    C:\DSpace

    _

    )

    directory:

    Code Block
    [dspace]\bin\dspace create-administrator
    Wiki Markup
  8. Copy the Web application directories from _\[dspace\]\webapps_ to Tomcat's webapps dir, which should be somewhere like _C:\Program Files\Apache Software Foundation\Tomcat\webapps_
    • Wiki Markup

      Alternatively,

      Tell

      your

      Tomcat

      installation

      where

      to

      find

      your

      DSpace

      web

      application(s).

      As

      an example, in the <Host> section of your [tomcat]/conf/server.xml you could add lines similar to the following (but replace [dspace]with your installation location):

      example, in the _<Host>_ section of your _\[tomcat\]/conf/server.xml_ you could add lines similar to the following (but replace _\[dspace\]_ with your installation location):
      Code Block
      <!-- DEFINE A CONTEXT PATH FOR DSpace XML User Interface  -->
      <Context path="/xmlui" docBase="[dspace]/webapps/xmlui" debug="0"
      	reloadable="true" cachingAllowed="false"
      	allowLinking="true"/>
      
      <!-- DEFINE A CONTEXT PATH FOR DSpace JSP User Interface  -->
      <Context path="/jspui" docBase="[dspace]/webapps/jspui" debug="0"
      	reloadable="true" cachingAllowed="false"
      	allowLinking="true"/>
      
      Code Block
      <!-- DEFINE A CONTEXT PATH FOR DSpace JSPOAI User Interface  -->
      <Context path="/jspuioai" docBase="[dspace]\/webapps\jspui/oai" debug="0"
      	reloadable="true" cachingAllowed="false"
      	allowLinking="true"/>
      
      <!-- DEFINE A CONTEXT PATH FOR DSpace OAI User Interface ADDITIONAL CONTEXT PATHS FOR OTHER DSPACE WEB APPLICATIONS (SOLR, SWORD, LNI, etc.).
           CHANGE THE VALUE OF "[app]" FOR EACH APPLICATION YOU WISH TO ADD -->
      <Context path="/oai[app]" docBasedocbase="[dspace]\webapps\oai/webapps/[app]" debug="0"
      	reloadable="true" cachingAllowed="false"
      	allowLinking="true"/>
      
  9. Start the Tomcat service
  10. Browse to either http://localhost:8080/jspui or http://localhost:8080/xmlui. You should see the DSpace home page for either the JSPUI or XMLUI, respectively.

...

The administrator needs to check the installation to make sure all components are working. Here is list of checks to be performed. In brackets after each item, it the associated component or components that might be the issue needing resolution.

...

  • System is up and running. _User can see the DSpace home page. \ [Tomcat/Jetty, firewall, IP assignment, DNS\]_
  • Wiki MarkupDatabase is running and working correctly. _Attempt to create a user, community or collection \ [PostgreSQL, Oracle\]_{_}Run the test database command to see if other issues are being report:__\[dspace\]/bin/dspace test-database_
  • Wiki MarkupEmail subsystem is running. The user can issue the following command to test the email system. t attempts to send a test email to the email address that is set in dspace.cfg (mail.admin). If it fails, you will get messages informing you as to why, will refer you to the DSpace documentation. _\[dspace\]/bin/test-email_

Known Bugs

In any software project of the scale of DSpace, there will be bugs. Sometimes, a stable version of DSpace includes known bugs. We do not always wait until every known bug is fixed before a release. If the software is sufficiently stable and an improvement on the previous release, and the bugs are minor and have known workarounds, we release it to enable the community to take advantage of those improvements.

...

  • Database errors occur when you run ant fresh_install: There are two common errors that occur.
    • If your error looks like this:

      unmigrated-wiki-markup
      Code Block
      [java] 2004-03-25 15:17:07,730 INFO
      	    org.dspace.storage.rdbms.InitializeDatabase @ Initializing Database
      [java] 2004-03-25 15:17:08,816 FATAL
      	    org.dspace.storage.rdbms.InitializeDatabase @ Caught exception:
      [java] org.postgresql.util.PSQLException: Connection refused. Check
      	    that the hostname and port are correct and that the postmaster is
      	    accepting TCP/IP connections.
      [java]     at
      	    org.postgresql.jdbc1.AbstractJdbc1Connection.openConnection(AbstractJd
      bc1Connection.java:204)
      [java]     at org.postgresql.Driver.connect(Driver.java:139)
       

      it

      usually

      means

      you

      haven't

      yet

      added

      the

      relevant

      configuration

      parameter

      to

      your

      PostgreSQL

      configuration

      (see

      above),

      or

      perhaps

      you

      haven't

      restarted

      PostgreSQL

      after

      making

      the

      change.

      Also,

      make

      sure

      that

      the

      _

      db.username

      _

      and

      _

      db.password

      _

      properties

      are

      correctly

      set

      in

      _\

      [dspace

      \

      ]/config/dspace.cfg

      _

      .

      An

      easy

      way

      to

      check

      that

      your

      DB

      is

      working

      OK

      over

      TCP/IP

      is

      to

      try

      this

      on

      the

      command

      line:

      Code Block
      
      psql -U dspace -W -h localhost

      Enter the dspace database password, and you should be dropped into the psql tool with a dspace=> prompt.

    • Another common error looks like this:

      Code Block
      [java] 2004-03-25 16:37:16,757 INFO
      	    org.dspace.storage.rdbms.InitializeDatabase @ Initializing Database
      [java] 2004-03-25 16:37:17,139 WARN
      	    org.dspace.storage.rdbms.DatabaseManager @ Exception initializing DB
      	    pool
      [java] java.lang.ClassNotFoundException: org.postgresql.Driver
      [java]     at java.net.URLClassLoader$1.run(URLClassLoader.java:198)
      [java]     at java.security.AccessController.doPrivileged(Native
      	   Method)
      [java]     at
      	   java.net.URLClassLoader.findClass(URLClassLoader.java:186)
      Wiki Markup

      This

      means

      that

      the

      PostgreSQL

      JDBC

      driver

      is

      not

      present

      in

      _\

      [dspace

      \

      ]/lib

      _

      .

      See

      above.

  • GeoLiteCity Database file fails to download or install, when you run ant fresh_install: There are two common errors that may occur:
    • If your error looks like this:

      Code Block
      [get] Error getting http://geolite.maxmind.com/download/geoip/database/GeoLiteCity.dat.gz to /usr/local/dspace/config/GeoLiteCity.dat.gz
      
      BUILD FAILED
      /dspace-release/dspace/target/dspace-1.78.20-build.dir/build.xml:931: java.net.ConnectException: Connection timed out
      

      it means that you likely either (a) don't have an internet connection to download the necessary GeoLite Database file (used for DSpace Statistics), or (b) the GeoLite Database file's URL is no longer valid. You should be able to resolve this issue by following the "Manually Installing/Updating GeoLite Database File" instructions above.

    • Another common message looks like this:

      Code Block
      [echo] WARNING : FAILED TO DOWNLOAD GEOLITE DATABASE FILE
      [echo]          (Used for DSpace Solr Usage Statistics)

      Again, this means the GeoLite Database file cannot be downloaded or is unavailable for some reason. You should be able to resolve this issue by following the "Manually Installing/Updating GeoLite Database File" instructions above.

General DSpace Issues

  • Tomcat doesn't shut down: If you're trying to tweak Tomcat's configuration but nothing seems to make a difference to the error you're seeing, you might find that Tomcat hasn't been shutting down properly, perhaps because it's waiting for a stale connection to close gracefully which won't happen.
    • To see if this is the case, try running: ps -ef | grep java and look for Tomcat's Java processes. If they stay around after running Tomcat's shutdown.sh script, trying running kill on them (or kill -9 if necessary), then starting Tomcat again.
  • Database connections don't work, or accessing DSpace takes forever: If you find that when you try to access a DSpace Web page and your browser sits there connecting, or if the database connections fail, you might find that a 'zombie' database connection is hanging around preventing normal operation.
    • To see if this is the case, try running: ps -ef | grep postgres
    • You might see some processes like this:

      Code Block
      dspace 16325  1997  0  Feb 14  ?         0:00 postgres: dspace dspace    127.0.0.1 idle in transaction

      This is normal. DSpace maintains a 'pool' of open database connections, which are re-used to avoid the overhead of constantly opening and closing connections. If they're 'idle' it's OK; they're waiting to be used.

    • However sometimes, if something went wrong, they might be stuck in the middle of a query, which seems to prevent other connections from operating, e.g.:

      Code Block
      dspace 16325  1997  0  Feb 14  ?         0:00 postgres: dspace dspace    127.0.0.1 SELECT

      This means the connection is in the middle of a SELECT operation, and if you're not using DSpace right that instant, it's probably a 'zombie' connection. If this is the case, try running kill on the process, and stopping and restarting Tomcat.