Date

02 May 2023

Call-in Information

Time: 10:00 am, Eastern Time (New York), 4pm Central European Summer Time

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Slack

• https://vivo-project.slack.com
  • Self-register at: http://bit.ly/vivo-slack
    

Attendees

 Indicating note-taker

1. Dragan Ivanovic 
2. Miloš Popović 
3. Doug Chestnut
4. Michael Bentz
5. William Welling 
6. Ivan Mrsulja
7. Michel Héon 

Agenda

• Questions/Issues/Pull requests/Announcements
  • WCAG  compliance
    • committers call 
  • VIVO-harvester
    • https://github.com/vivo-community/VIVO-Harvester/issues/55
  • Customization of ontologies
    • appear in the list of ontologies, but no classes 
      • https://vivo-project.slack.com/archives/C8RL9L98A/p1682065844193869
  • Login error
    • https://groups.google.com/g/vivo-tech/c/w7ZSKlujGqY/m/yhV4XqeVAwAJ?utm_medium=email&utm_source=footer
  • Can't create a new class
    • https://groups.google.com/g/vivo-tech/c/_LJmdEpbHWY/m/YQdg6jM9BAAJ?utm_medium=email&utm_source=footer
  • New pull requests
    • Escape html
      • consequence of reviewing https://github.com/vivo-project/VIVO/issues/3864 
      • https://github.com/vivo-project/Vitro/pull/388
      • https://github.com/vivo-project/VIVO/pull/3868
• Priorities 
  
  • What would you like to have in some future version of VIVO?
    • GDPR alignment
      • SPARQL API endpoint
      • GUI
    • Interoperability
      • OAI-PMH endpoint
      • data ingestion
      • Cross-site linking and searching
      • JSON-like REST endpoint
    • VIVO as a service
      • hosting 
      • decoupling data store
      • vivo_home
      • solr
      • multitenancy
        • https://en.wikipedia.org/wiki/Multitenancy
    • Consolidation of data
      • Deduplication
      • Splitting two person profiles
      • Enrichment of data
        • OpenAIRE broker - https://graph.openaire.eu/develop/broker.html
        • Altmetrics - Altmetrics Support
    • Reporting
    • Project centered VIVO
  • Which improvements are needed?
    • Installation
    • Documentation
    • Customization

Notes

• WCAG  compliance

Dragan: Nothing to report right now, maybe next week.

• VIVO-harvester

Dragan: Community member tried to run harvester, but it hasn’t been used for a while, he will be added to slack channel so we can help him. If anyone knows if it is working with 1.13 please give information because it’s not so active project and we had some significant changes in the last couple years.

• Customization of ontologies

Dragan: issue was reported when customizing ontologies, I tried to push conversation but I dont know if we had any progress. Will give more info next week.

JUAN REPORTED: Mailing issue reported, but it is maybe resolved in the meantime, will investigate further. SQL exception bug, it looks that only insert is not working but update is working.

• New pull requests

Dragan: Georgy created PR for removing some HTML elements from the data property values. In review I noticed an issue with FTL files, Georgy fixed that as well.

• Consolidation of data

Dragan: Common problem for all RIS, in data harvesting you can collect duplicate data, we need to add deduplication of data tool for admin users. Tool should detect potential duplicates and give functionality to merge references (combine/enrich metadata) through nice GUI or decouple (split) profiles. Enrichment would be nice to be possible through external services (OpenAIRE broker for example).

Michel: We did a lot of work in our institution, we need to add a method in VIVO that can use a natural identifier (like email) that can detect potential matches. Maybe build an identity server where we can identify person, institution and article?

Draft notes in Google Docs

Task List

Previous Tasks 

• Dragan Ivanovic to discuss with VIVO committers whether we can improve VIVO WCAG  compliance
• Brian Lowe will work on implementation of https://github.com/vivo-project/VIVO/issues/3770
• William Welling will improve docker images (https://github.com/vivo-project/VIVO/issues/3857)
• Dragan Ivanovic will increase priority of https://github.com/vivo-project/VIVO/issues/3858, and https://github.com/vivo-project/VIVO/issues/3859 
• Dragan Ivanovic will continue communication with Joseph about the issue with mass removing data via slack
• Dragan Ivanovic to share results of discussion about using Docker images with Rodrigo via https://groups.google.com/g/vivo-tech/c/yAOHcsJg8ro (the problem might be that VIVO docker container is not seeing vivo-solr container, meaning it is a network mode issue)
• William Welling to upgrade docker instructions in VIVO GitHub
• Dragan Ivanovic to reorganize VIVO upgrade wiki pages - Upgrading VIVO
• Maxim Prokopenko to open a ticket (bug) for Solr index directory mount with docker compose (https://github.com/vivo-project/VIVO/issues/3857)
• All to think about priorities for further development of VIVO   
• Dragan Ivanovic to check whether PDFDocument class is needed at all (and itext dependency)
• Dragan Ivanovic to open a ticket (github issue) for ingesting sample data memory problem
• all
  • to provide feedback on https://docs.google.com/document/d/1jIIr90vTpI4l5KZeM30f_gOc-TpmlgKol-2oOEaU2Is/edit?usp=sharing,
  • consider participating in https://forms.gle/16QbRU62CmJCaeJp8
  • check personal calendars for the next sprint (May 22nd - June 9th, 2023)
• Dragan Ivanovic to announce publishing VIVO 1.14.0 RC2
• someone to test RC2
  • Ivan Mrsulja tested RC2
• Dragan Ivanovic to create survey for collecting standard practice in VIVO deployment process 

• Dragan Ivanovic to add columns in the project board for Priority and Difficulty.
• Sprint participants to read description of issues and think about their preferences. 

• Dragan Ivanovic will contact Lyrasis admins to get an account for https://vivo.lyrasis.org/
• Dragan Ivanovic will fix issues with layout and French sample data and publication graph - https://github.com/vivo-project/VIVO/pull/3810
• Georgy Litvinov will fix the issue with faux data properties with xml literal range - https://github.com/vivo-project/Vitro/pull/363
• William Welling will review previously described issues
• Dragan Ivanovic will work on specification of tasks for the next sprint - https://github.com/orgs/vivo-project/projects/5 and https://github.com/orgs/vivo-project/projects/6
• Dragan Ivanovic to send a test email through contact form - https://vivo.lyrasis.org/contact/
• William Welling to complete review/testing of  https://github.com/vivo-project/VIVO/pull/3805 and to summarize results in the PRs comments
•  Dragan Ivanovic to review William's comments and check what should be fixed/resolved before merging of the the branch
  • Georgy Litvinov to fix issues with Russian email templates
  • Georgy Litvinov to fix issues with faux data properties
• All to think about organization/improvements of sample data, Dragan Ivanovic to add an item in the next week agenda for discussion
• Dragan Ivanovic in communication with Georgy Litvinov to write/update documentation for faux (data) properties
• Dragan Ivanovic to review and merge 
  • https://github.com/vivo-project/Vitro/pull/360
  • https://github.com/vivo-project/Vitro/pull/361

• Brian Lowe to review https://github.com/vivo-project/VIVO/pull/3788 and https://github.com/vivo-project/Vitro/pull/341 preferably by end of the week (11/25/2022)
• Brian Lowe to review https://github.com/vivo-project/Vitro/pull/347
• Michel Héon to validate https://github.com/vivo-project/Vitro/pull/347 and test performance with remote Fuseki 
• Anyone to validate https://github.com/vivo-project/Vitro/pull/348 and https://github.com/vivo-project/VIVO/pull/3797 preferably by end of the week (11/25/2022)  - description how it should be validated provided in the PR description
• Benjamin Kampe to review https://github.com/vivo-project/Vitro/pull/349 and https://github.com/vivo-project/VIVO/pull/3795 preferably by end of the week (11/25/2022)
• Dragan Ivanovic to create PR in cooperation with Michel Héon for merging ttl files (labels' translations) into Vitro/VIVO repositories
• Dragan Ivanovic to ask Arif for more info on the reported issue - https://groups.google.com/g/vivo-tech/c/gmyQIMWbm_Y
• Dragan Ivanovic to open a ticket for https://groups.google.com/g/vivo-tech/c/wDblxLmeTjs. Done, ticket available at https://github.com/vivo-project/VIVO/issues/3772
• Dragan Ivanovic will redirect reporter of this issue https://github.com/vivo-community/vivo-docker2/issues/22 to https://github.com/vivo-project/VIVO#docker
• All to analyze the issue reported in the slack (https://vivo-project.slack.com/archives/C8RL9L98A/p1663253504895989) and check whether we should open a GitHub issue and add to the i18n redesign project board - https://github.com/orgs/vivo-project/projects/4 
• Brian Lowe will respond on the email https://groups.google.com/g/vivo-tech/c/5AY9h15h4vc/m/OjqekVxlBgAJ?utm_medium=email&utm_source=footer&pli=1
• All to consider participation in the sprint and register via https://forms.gle/qLi1PhRrrpvUrrYRA
• Dragan Ivanovic to work on specification of tasks for the sprint - GitHub project board
• Michel Héon to work on the translation messages ontology
• Dragan Ivanovic will bring up with leadership group that we would like to set up task force for dynamic API
• Dragan Ivanovic will create infrastructure for the next sprint (slack channel, GitHub project board, wiki page, GitHub branch, GitHub issues, etc.)
• Michel Héon to work on the ontology for UI labels (in multiple languages)
• All to think about dates for the next sprint
• Dragan Ivanovic to resolve conflicts for https://github.com/vivo-project/Vitro/pull/311 and https://github.com/vivo-project/Vitro/pull/297
• Dragan Ivanovic to write script for preparing a release candidate - started at https://github.com/chenejac/VIVO-release-publisher
• All to test the release candidate - Release Testing - 1.13.0
• Dragan Ivanovic to publish VIVO 1.13.0 release (if there is no reported issue till 1st of September)
• Dragan Ivanovic to prepare presentation for demo meeting - 2022-07-07 - Dynamic API demo meeting
• Dragan Ivanovic to send reminder for the demo meeting - 2022-07-07 - Dynamic API demo meeting
• Dragan Ivanovic to open an issue for a reverse proxy (redirecting) - https://vivo-project.slack.com/archives/C8RL9L98A/p1651739159126489
  • https://github.com/vivo-project/VIVO/issues/3698
• Dragan Ivanovic to contact Andrew Wood for resolving the issue with registration for the Slack channel
• All to consider participation in the sprint and if decide  to participate to register for the sprint - link
• Dragan Ivanovic to send a require to add in the Leadership group agenda a topic for discussing Copyright owner in License
• All please help in filling this document - spreadsheet
•  Dragan Ivanovic to create a draft version of a Google Spreadsheet document with labeled columns representing requirements and to share with committers
• Committers to review the structure of the document and to fill it with data for JS and CSS frameworks