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  • Stony Brook
    • how to share common vocabularies – how to collaborate on this and where to host/store the data
    • Jon suggesting extending a service like the UMLS service built at Stony Brook – does such a list exist; if not, where would be put it; how would you access it
    • According to http://www.ibm.com/developerworks/library/wa-datasets/ the British government posted research funding datasets online as RDF data.  Tammy is currently checking to see if the US has posted any such data.

  • Florida
    • Updated to VIVO 1.5.1, but having re-index errors and mailing list thread hasn't been resolved... discussed on call... possible root cause is bad data in MySQL evidenced by repeated errors in logs...
  • Weill
    • Cleaning up the publication data
    • Working to improve performance. Plan on increasing the database cache. So far we have increased the MySQL Query_cache_size to 64M. Do we need more? What's the cache size for other sites?
    • Matt at UF: were looking at query_cache_size also – what is optimal (versus restarting Tomcat)? 
    • Tammy: running mysql tuner... responded to us... Tammy: Running the MySQLTuner script on our system, made the recommendation "Variables to adjust:      query_cache_size (> 32M)".  (Note that everybody's system may be different.) 
  • UCSF
    • Updating to VIVO-compatible version of Profiles, but converting data is time consuming

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